RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TNFP01375 233 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 RPS15AP62244 130 aaKnown RBP16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 YPEL5P62699 121 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 DNM1P34Q6PK57 102 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 KLHDC3Q9BQ90 382 aa16.36■□□□□ 0.21
SEMA4B-215ENST00000560089 MPPED1O15442 326 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 HIST3H3Q16695 136 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 HLA-DRB5Q30154 266 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 OR2Y1Q8NGV0 311 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 NT5CQ8TCD5 201 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 KIAA1324LA8MWY0 1029 aaPredicted RBP16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 RELBQ01201 579 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 PMCHL1Q16048 86 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 PRSS41Q7RTY9 318 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 HAPLN4Q86UW8 402 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 SPEM1Q8N4L4 309 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 KCNS1Q96KK3 526 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 PLSCR4Q9NRQ2 329 aa16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 PNO1Q9NRX1 252 aaKnown RBP16.35■□□□□ 0.21
SEMA4B-215ENST00000560089 PPIAL4GP0DN37 164 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 HERV-K104P61576 105 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 SELENOHQ8IZQ5 122 aaKnown RBP16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 DEFB125Q8N687 156 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 OR1B1Q8NGR6 318 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 MDFIC2A0A1B0GVS7 189 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 S1PR2O95136 353 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 ZNF10P21506 573 aaPredicted RBP16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 CXCL12P48061 93 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 PSG4Q00888 419 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 ZNF90Q03938 601 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 KISS1Q15726 138 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 FAM58AQ8N1B3 248 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 BCORP1Q8N888 145 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 SFRP2Q96HF1 295 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 TM2D1Q9BX74 207 aa16.34■□□□□ 0.21
SEMA4B-215ENST00000560089 C10orf142B7Z368 130 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 HRKO00198 91 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 SMIM10L1P0DMW3 83 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 KITLGP21583 273 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 S100GP29377 79 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 LCN12Q6JVE5 192 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 RPP25LQ8N5L8 163 aaKnown RBP16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 BORCS7Q96B45 105 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 SMIM10Q96HG1 83 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 VSTM2LQ96N03 204 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 SLC25A22Q9H936 323 aa16.33■□□□□ 0.21
SEMA4B-215ENST00000560089 TRAV9-2A0A087WT02 112 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 IGKV1-9A0A0C4DH69 117 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 A0A1W2PS18 150 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 C17orf112F2Z3M2 114 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 PAGE4O60829 102 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 NAT6Q93015 286 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 MRPL13Q9BYD1 178 aaKnown RBP16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 ABI3Q9P2A4 366 aa16.33■□□□□ 0.2
SEMA4B-215ENST00000560089 IGLC1P0CG04 106 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 PLA2G5P39877 138 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 PPP1CAP62136 330 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 SGCBQ16585 318 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 SLC37A2Q8TED4 501 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 C11orf40Q8WZ69 217 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 ZNF48Q96MX3 618 aaPredicted RBP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 LRRC61Q9BV99 259 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 WDR61Q9GZS3 305 aaKnown RBP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 LYRM4Q9HD34 91 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 CABIN1Q9Y6J0 2220 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 M0R1X1 148 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 NUDT3O95989 172 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 CD38P28907 300 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 ARF3P61204 181 aaPredicted RBP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 ARF1P84077 181 aaKnown RBP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 CNN3Q15417 329 aaKnown RBP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 BATF2Q8N1L9 274 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 OR10W1Q8NGF6 305 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 ZNF501Q96CX3 271 aaPredicted RBP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 ARHGAP21Q5T5U3 1957 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 LRP4O75096 1905 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 TRAV8-6A0A0B4J262 113 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 K7ESF4 209 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 CA2P00918 260 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 IGKV1D-33P01593 117 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 IGKV1-33P01594 117 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 IGLL1P15814 213 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 EGR1P18146 543 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 NPPCP23582 126 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 IER3P46695 156 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 ZNF83P51522 516 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 C5orf17Q8NAS9 161 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 FAM216AQ8WUB2 273 aa16.32■□□□□ 0.2
SEMA4B-215ENST00000560089 TRAV36DV7A0A075B6V5 113 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 MUC21A0A0G2JKD1 596 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 MUC21A0A140T8X8 626 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 PGPEP1LA6NFU8 196 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 SNURFLB1AK76 121 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 ZNF324O75467 553 aaPredicted RBP16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 MT-CO2P00403 227 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 SCGB1A1P11684 91 aa16.31■□□□□ 0.2
SEMA4B-215ENST00000560089 PVRP15151 417 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms