RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PLGLAQ15195 96 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 TRAM1Q15629 374 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 ZNF660Q6AZW8 331 aaPredicted RBP9.57□□□□□ -0.88
SPG11-219ENST00000559822 ZNF880Q6PDB4 577 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 TCTEX1D1Q8N7M0 179 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 PLGRKTQ9HBL7 147 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 LSM2Q9Y333 95 aaKnown RBP9.57□□□□□ -0.88
SPG11-219ENST00000559822 TPRKBQ9Y3C4 175 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 WSB1Q9Y6I7 421 aa9.57□□□□□ -0.88
SPG11-219ENST00000559822 TRBV6-6A0A0A6YYG2 114 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 IGHV7-81A0A0B4J1V7 117 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ERICH4A6NGS2 130 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 G3V318 75 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ST8SIA5O15466 376 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 HSPA12AO43301 675 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 IGLV1-40P01703 118 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 GSTP1P09211 210 aaKnown RBP9.56□□□□□ -0.88
SPG11-219ENST00000559822 CD37P11049 281 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ARSBP15848 533 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ZBTB25P24278 435 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 CNTFRP26992 372 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ECI1P42126 302 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ZNF616Q08AN1 781 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 TMEM267Q0VDI3 215 aaPredicted RBP9.56□□□□□ -0.88
SPG11-219ENST00000559822 ZNF260Q3ZCT1 412 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 LIPKQ5VXJ0 399 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 FAM131AQ6UXB0 335 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 ZNF491Q8N8L2 437 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 OR1N2Q8NGR9 330 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 RNF5Q99942 180 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 NICN1Q9BSH3 213 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 RNF150Q9ULK6 438 aa9.56□□□□□ -0.88
SPG11-219ENST00000559822 H7C2Y5 167 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 I3L521 148 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 SLC17A2O00624 439 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 RRHO14718 337 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 CD40LGP29965 261 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 RAB9AP51151 201 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 CRIP2P52943 208 aaPredicted RBP9.55□□□□□ -0.88
SPG11-219ENST00000559822 HLA-DRB3P79483 266 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 QRFPP83859 136 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 RAB11BQ15907 218 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 ECSCRQ19T08 205 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 PYHIN1Q6K0P9 492 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 MINDY2Q8NBR6 621 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 RBMXL1Q96E39 390 aaKnown RBP9.55□□□□□ -0.88
SPG11-219ENST00000559822 RITA1Q96K30 269 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 LPAR5Q9H1C0 372 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 GNB4Q9HAV0 340 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 ISYNA1Q9NPH2 558 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 C12orf4Q9NQ89 552 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 HSF4Q9ULV5 492 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 FOXA2Q9Y261 457 aaPredicted RBP9.55□□□□□ -0.88
SPG11-219ENST00000559822 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
SPG11-219ENST00000559822 WASHC3Q9Y3C0 194 aa9.55□□□□□ -0.88
SPG11-219ENST00000559822 A0A1W2PN81 502 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 RGS10O43665 173 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 HSMCR30P0CW71 290 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 CT45A6P0DMU7 189 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 CT45A5P0DMU8 189 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 CT45A7P0DMV0 189 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 CHRNA7P36544 502 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 CEACAM6P40199 344 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 PSMD7P51665 324 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 MRPS15P82914 257 aaKnown RBP9.54□□□□□ -0.88
SPG11-219ENST00000559822 TPBGQ13641 420 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 IRF3Q14653 427 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 RPL39P5Q59GN2 51 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 ZNF429Q86V71 674 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 FAM89BQ8N5H3 189 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 OR5AN1Q8NGI8 311 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 ABHD5Q8WTS1 349 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 TMEM203Q969S6 136 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 ABHD14BQ96IU4 210 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 CYYR1Q96J86 154 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 PRR25Q96S07 402 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 TSNAXQ99598 290 aaKnown RBP9.54□□□□□ -0.88
SPG11-219ENST00000559822 KLK15Q9H2R5 256 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 KCNK15Q9H427 330 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 FBXL15Q9H469 300 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 AK3Q9UIJ7 227 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 SCOCQ9UIL1 159 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 ZNF221Q9UK13 617 aa9.54□□□□□ -0.88
SPG11-219ENST00000559822 LSM4Q9Y4Z0 139 aaKnown RBP9.54□□□□□ -0.88
SPG11-219ENST00000559822 A0A0A6YYD4 124 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 H0YJW9 148 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 SOCS1O15524 211 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 SPDEFO95238 335 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 CX3CL1P78423 397 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 MLLT11Q13015 90 aaPredicted RBP9.53□□□□□ -0.88
SPG11-219ENST00000559822 KIAA0141Q14154 515 aaPredicted RBP9.53□□□□□ -0.88
SPG11-219ENST00000559822 P2RY14Q15391 338 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 OR56B1Q8NGI3 324 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 PTX4Q96A99 478 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 OR5B12Q96R08 314 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 CMSS1Q9BQ75 279 aaKnown RBP9.53□□□□□ -0.88
SPG11-219ENST00000559822 AGMATQ9BSE5 352 aa9.53□□□□□ -0.88
SPG11-219ENST00000559822 C11orf54Q9H0W9 315 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms