RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 GNG2P59768 71 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 LSAMPQ13449 338 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 UBE2NLQ5JXB2 153 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 THNSL2Q86YJ6 484 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 Q8N2B8 174 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 Q8N6K4 173 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 GVQW1Q8N7I0 195 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 C5orf30Q96GV9 206 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 EAF1Q96JC9 268 aaPredicted RBP14.9□□□□□ -0.02
CASC4-209ENST00000559222 NABP2Q9BQ15 211 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 ST6GALNAC5Q9BVH7 336 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 AUNIPQ9H7T9 357 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 COMMD3Q9UBI1 195 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 RNF150Q9ULK6 438 aa14.9□□□□□ -0.02
CASC4-209ENST00000559222 TRBV6-7A0A0A0MS04 114 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 A0A1B0GUS0 222 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 MEIS3P1A6NDR6 274 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 PROP1O75360 226 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 SCGNO76038 276 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 LINC00205P59089 165 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 ABCA11PQ4W5N1 156 aa14.89□□□□□ -0.03
CASC4-209ENST00000559222 GLDNQ6ZMI3 551 aaPredicted RBP14.89□□□□□ -0.03
CASC4-209ENST00000559222 HPGDSO60760 199 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 FAM106CPP0CH98 169 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 EBI3Q14213 229 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 KIR2DS1Q14954 304 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 ARL6IP1Q15041 203 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 PNLIPRP3Q17RR3 467 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 Q6ZS49 121 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 KLHDC1Q8N7A1 406 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 OR2T6Q8NHC8 308 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 RITA1Q96K30 269 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 MOB4Q9Y3A3 225 aa14.88□□□□□ -0.03
CASC4-209ENST00000559222 TMEM127O75204 238 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 LPLP06858 475 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 RPL5P46777 297 aaKnown RBP14.87□□□□□ -0.03
CASC4-209ENST00000559222 TAS2R20P59543 309 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 SRSF7Q16629 238 aaKnown RBP eCLIP14.87□□□□□ -0.03
CASC4-209ENST00000559222 SHISA2Q6UWI4 295 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 C16orf82Q7Z2V1 217 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 C5orf56Q8N8D9 126 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 C11orf44Q8N8P7 122 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 PHF21AQ96BD5 680 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 KCTD12Q96CX2 325 aaKnown RBP14.87□□□□□ -0.03
CASC4-209ENST00000559222 CITED1Q99966 193 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 PRSS22Q9GZN4 317 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 TOLLIPQ9H0E2 274 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 DIABLOQ9NR28 239 aa14.87□□□□□ -0.03
CASC4-209ENST00000559222 A0A0A6YYH2 397 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 A6NJ64 397 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 ITGB1BP1O14713 200 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 TXNL1O43396 289 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 XRCC3O43542 346 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 CT45A6P0DMU7 189 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 CT45A5P0DMU8 189 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 CT45A7P0DMV0 189 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 VSIG10L2P0DP72 767 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 ELK1P19419 428 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 CNTFRP26992 372 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 CD1BP29016 333 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 RORCP51449 518 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 H1FOOQ8IZA3 346 aaPredicted RBP14.86□□□□□ -0.03
CASC4-209ENST00000559222 DRAXINQ8NBI3 349 aaPredicted RBP14.86□□□□□ -0.03
CASC4-209ENST00000559222 PLSCR3Q9NRY6 295 aa14.86□□□□□ -0.03
CASC4-209ENST00000559222 J3QRK9 145 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 MOSP00540 346 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 OR8U9P0C7N5 309 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 F2RL1P55085 397 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 C9orf152Q5JTZ5 239 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 C11orf88Q6PI97 169 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 FAM131AQ6UXB0 335 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 OR2T10Q8NGZ9 312 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 OR8U1Q8NH10 309 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 OR10J5Q8NHC4 309 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 EDARADDQ8WWZ3 215 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 SNAPC3Q92966 411 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 S100A16Q96FQ6 103 aaKnown RBP14.85□□□□□ -0.03
CASC4-209ENST00000559222 OR2D2Q9H210 308 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 PIPOXQ9P0Z9 390 aa14.85□□□□□ -0.03
CASC4-209ENST00000559222 RAB29O14966 203 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 NFYAP23511 347 aaPredicted RBP14.84□□□□□ -0.03
CASC4-209ENST00000559222 VDAC2P45880 294 aaPredicted RBP14.84□□□□□ -0.03
CASC4-209ENST00000559222 PITPNAQ00169 270 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 TMEM69Q5SWH9 247 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 C10orf99Q6UWK7 81 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 Q8N9W7 124 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 WIPF2Q8TF74 440 aaPredicted RBP14.84□□□□□ -0.03
CASC4-209ENST00000559222 GINS4Q9BRT9 223 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 WNT10AQ9GZT5 417 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 ANXA10Q9UJ72 324 aa14.84□□□□□ -0.03
CASC4-209ENST00000559222 LINC01548A6NM66 108 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 H3BMQ9 156 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 HLA-DQB1P01920 261 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 ZNF182P17025 639 aaPredicted RBP14.83□□□□□ -0.04
CASC4-209ENST00000559222 GPR12P47775 334 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 ARSJQ5FYB0 599 aaPredicted RBP14.83□□□□□ -0.04
CASC4-209ENST00000559222 FAM71F2Q6NXP2 309 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 HOGA1Q86XE5 327 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 ZNF383Q8NA42 475 aa14.83□□□□□ -0.04
CASC4-209ENST00000559222 BEST4Q8NFU0 473 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms