RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ZSWIM8A7E2V4 1837 aa5.39□□□□□ -1.55
CASC4-208ENST00000559151 SETD5Q9C0A6 1442 aa5.39□□□□□ -1.55
CASC4-208ENST00000559151 ARHGAP5Q13017 1502 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 CBR3O75828 277 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 C1DQ13901 141 aaKnown RBP5.38□□□□□ -1.55
CASC4-208ENST00000559151 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CASC4-208ENST00000559151 TMEM208Q9BTX3 173 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 METTL9Q9H1A3 318 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 C11orf49Q9H6J7 331 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 CLUHO75153 1309 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 RALGAPBQ86X10 1494 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 ABCC3O15438 1527 aa5.38□□□□□ -1.55
CASC4-208ENST00000559151 SPHKAPQ2M3C7 1700 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 CDC42BPAQ5VT25 1732 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 DAPL1A0PJW8 107 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 KLRC4-KLRK1H3BQV0 150 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 ITGB1BP1O14713 200 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 TSPAN31Q12999 210 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 DNAL1Q4LDG9 190 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 TRMT12Q53H54 448 aaKnown RBP5.37□□□□□ -1.55
CASC4-208ENST00000559151 SDHAF4Q5VUM1 108 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 RIBC1Q8N443 379 aaPredicted RBP5.37□□□□□ -1.55
CASC4-208ENST00000559151 DNAJB3Q8WWF6 145 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 INO80Q9ULG1 1556 aaPredicted RBP5.37□□□□□ -1.55
CASC4-208ENST00000559151 UBR1Q8IWV7 1749 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 SHANK3Q9BYB0 1731 aa5.37□□□□□ -1.55
CASC4-208ENST00000559151 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.37□□□□□ -1.55
CASC4-208ENST00000559151 C1orf232A0A0U1RR37 186 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 F5H5T6 163 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 M0QYV0 167 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 SLC31A1O15431 190 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 OPN1SWP03999 348 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 TPM3P06753 285 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 OR12D1P0DN82 309 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 TPM4P67936 248 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 CD302Q8IX05 232 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 OR52E4Q8NGH9 312 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 EBNA1BP2Q99848 306 aaKnown RBP5.36□□□□□ -1.55
CASC4-208ENST00000559151 C15orf41Q9Y2V0 281 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.36□□□□□ -1.55
CASC4-208ENST00000559151 TROQ12816 1431 aaPredicted RBP5.36□□□□□ -1.55
CASC4-208ENST00000559151 PZPP20742 1482 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 SAMD9LQ8IVG5 1584 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 MAST1Q9Y2H9 1570 aa5.36□□□□□ -1.55
CASC4-208ENST00000559151 GLI3P10071 1580 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 A2MP01023 1474 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 NCOA2Q15596 1464 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 ATP8B1O43520 1251 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 AGTR1P30556 359 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 CLEC12BQ2HXU8 276 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 PYCR3Q53H96 274 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 GTSF1LQ9H1H1 148 aa5.35□□□□□ -1.55
CASC4-208ENST00000559151 MCTS1Q9ULC4 181 aaKnown RBP5.35□□□□□ -1.55
CASC4-208ENST00000559151 CAMSAP2Q08AD1 1489 aa5.34□□□□□ -1.55
CASC4-208ENST00000559151 METTL15A6NJ78 407 aa5.34□□□□□ -1.55
CASC4-208ENST00000559151 ARL6IP5O75915 188 aa5.34□□□□□ -1.55
CASC4-208ENST00000559151 TBC1D28Q2M2D7 210 aa5.34□□□□□ -1.55
CASC4-208ENST00000559151 SCXQ7RTU7 201 aa5.34□□□□□ -1.55
CASC4-208ENST00000559151 TMEM75Q8N9X5 138 aa5.34□□□□□ -1.55
CASC4-208ENST00000559151 NOSIPQ9Y314 301 aaKnown RBP5.34□□□□□ -1.55
CASC4-208ENST00000559151 CHD2O14647 1828 aaKnown RBP5.34□□□□□ -1.55
CASC4-208ENST00000559151 RGPD1P0DJD0 1748 aa5.34□□□□□ -1.56
CASC4-208ENST00000559151 CCRL2O00421 344 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 SLC25A20O43772 301 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 ZNF22P17026 224 aaPredicted RBP5.33□□□□□ -1.56
CASC4-208ENST00000559151 PSMB3P49720 205 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 BSPH1Q075Z2 132 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 PDGFRLQ15198 375 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 OR8G1Q15617 311 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 HLA-DRB5Q30154 266 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 TNFAIP8L1Q8WVP5 186 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 RAD51AP1Q96B01 352 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 OR8B2Q96RD0 313 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 HIGD2AQ9BW72 106 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 GLS2Q9UI32 602 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 LINC00527Q9UJ94 153 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 SDK2Q58EX2 2172 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 TET3O43151 1660 aa5.33□□□□□ -1.56
CASC4-208ENST00000559151 NKTRP30414 1462 aaKnown RBP5.32□□□□□ -1.56
CASC4-208ENST00000559151 EEA1Q15075 1411 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 FMN1Q68DA7 1419 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 MARF1Q9Y4F3 1742 aaKnown RBP5.32□□□□□ -1.56
CASC4-208ENST00000559151 IGLV10-54A0A075B6I4 117 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 H3BSA7 217 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 PSCAO43653 123 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 FBP1P09467 338 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 ORM2P19652 201 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 CRABP1P29762 137 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 MAPK14Q16539 360 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 CCDC122Q5T0U0 273 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 SPATA31B1PQ5VZV4 182 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 NOXRED1Q6NXP6 359 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 DRAM2Q6UX65 266 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 PPCDCQ96CD2 204 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 WASHC3Q9Y3C0 194 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 ATP6V1DQ9Y5K8 247 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 SLIT1O75093 1534 aa5.32□□□□□ -1.56
CASC4-208ENST00000559151 MROH1Q8NDA8 1641 aa5.31□□□□□ -1.56
CASC4-208ENST00000559151 COCHO43405 550 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 474.4 ms