RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 HERPUD1Q15011 391 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 HMGN3Q15651 99 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM30BQ3MIR4 351 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 Q3ZCU0 254 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 CT45A1Q5HYN5 189 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 HES5Q5TA89 166 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 TRAT1Q6PIZ9 186 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 SLC25A48Q6ZT89 311 aaKnown RBP4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF554Q86TJ5 538 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 NR2C2APQ86WQ0 139 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR8H3Q8N146 312 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 DRAM1Q8N682 238 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 CT45A3Q8NHU0 189 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 CAPSLQ8WWF8 208 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 ST6GALNAC6Q969X2 333 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 FAM3DQ96BQ1 224 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 GNG12Q9UBI6 72 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 V9GY05 133 aa4.79□□□□□ -1.64
CTDSPL2-204ENST00000558966 IGHV3-72A0A0B4J1Y9 119 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 A0A0B4J203 849 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 IGHV1-3A0A0C4DH29 117 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM272A0A1B0GTI8 110 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 PAX4O43316 350 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 GALP22466 123 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 PPP1CCP36873 323 aaKnown RBP4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 VDAC2P45880 294 aaPredicted RBP4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 TMEM50BP56557 158 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 C2orf76Q3KRA6 126 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 ABCA11PQ4W5N1 156 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 C22orf42Q6IC83 251 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF880Q6PDB4 577 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 ZNF773Q6PK81 442 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 Q6ZTK2 550 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 OR52L2PQ8NGH6 319 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 RTN4IP1Q8WWV3 396 aaPredicted RBP4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 FCGR1BQ92637 280 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 RBMXL1Q96E39 390 aaKnown RBP4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 AKR1E2Q96JD6 320 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 NEU1Q99519 415 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 HDHD3Q9BSH5 251 aaPredicted RBP4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 URM1Q9BTM9 101 aaKnown RBP4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 RAB9BQ9NP90 201 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 STEAP1Q9UHE8 339 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 AK3Q9UIJ7 227 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 MOB4Q9Y3A3 225 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 LRRC42Q9Y546 428 aa4.78□□□□□ -1.64
CTDSPL2-204ENST00000558966 TRBV6-6A0A0A6YYG2 114 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 IFITM5A6NNB3 132 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 RAB27BO00194 218 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PDCD5O14737 125 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 IGKV1D-33P01593 117 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 IGKV1-33P01594 117 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 GAPDHP04406 335 aaKnown RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 FAM106CPP0CH98 169 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 CD28P10747 220 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 TMEM11P17152 192 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 RAB3BP20337 219 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 MYL9P24844 172 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 FGF9P31371 208 aaPredicted RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 VEGFCP49767 419 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PSMD7P51665 324 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 HTD2P86397 168 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 EBI3Q14213 229 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 HES1Q14469 280 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 HNF4GQ14541 408 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 C2orf68Q2NKX9 166 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 KCTD21Q4G0X4 260 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 MORN2Q502X0 79 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PLAC9Q5JTB6 97 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 MOB3BQ86TA1 216 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 IZUMO1Q8IYV9 350 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 LYG1Q8N1E2 194 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 Q8N6K4 173 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 ARHGAP5-AS1Q96IT6 56 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PECRQ9BY49 303 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 MMP27Q9H306 513 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR2S2Q9NQN1 319 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 PLEKHJ1Q9NW61 149 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 TXNL4BQ9NX01 149 aaKnown RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 KCNIP1Q9NZI2 227 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 JPT1Q9UK76 154 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 HSF4Q9ULV5 492 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 DNAH3Q8TD57 4116 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 TGP01266 2768 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 SMIM30A4D0T7 59 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 ZNF736B4DX44 427 aaPredicted RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 M0QZK8 103 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 YPEL1O60688 119 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 SLC2A2P11168 524 aaPredicted RBP4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 IL3RAP26951 378 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 NHLH2Q02577 135 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 MOGAT2Q3SYC2 334 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 LY6G6FQ5SQ64 297 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 C10orf99Q6UWK7 81 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 MOB1BQ7L9L4 216 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 TGIF2LXQ8IUE1 241 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 ODF3L1Q8IXM7 274 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 C5orf56Q8N8D9 126 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 OR56B1Q8NGI3 324 aa4.77□□□□□ -1.65
CTDSPL2-204ENST00000558966 FAM110DQ8TAY7 271 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms