RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CYB5R2Q6BCY4 276 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 PNKDQ8N490 385 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 OR11H6Q8NGC7 330 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 ZFAND1Q8TCF1 268 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 CREB3L1Q96BA8 519 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 RTBDNQ9BSG5 229 aaPredicted RBP14.74□□□□□ -0.05
CLPX-203ENST00000558958 MARVELD1Q9BSK0 173 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 OR2D2Q9H210 308 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 C5orf66Q9H5L9 145 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 CCL28Q9NRJ3 127 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 ZNRD1Q9P1U0 126 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 AUP1Q9Y679 476 aa14.74□□□□□ -0.05
CLPX-203ENST00000558958 SMAD7O15105 426 aaKnown RBP14.73□□□□□ -0.05
CLPX-203ENST00000558958 IGLV1-47P01700 117 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 IGLV2-14P01704 120 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 RLN1P04808 185 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 CTSDP07339 412 aaPredicted RBP14.73□□□□□ -0.05
CLPX-203ENST00000558958 H2AFB2P0C5Z0 115 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 HOXB4P17483 251 aaPredicted RBP14.73□□□□□ -0.05
CLPX-203ENST00000558958 PI3P19957 117 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 KLRD1Q13241 179 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 ZNF818PQ6ZRF7 136 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 ZNF645Q8N7E2 425 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 ZNF486Q96H40 463 aaPredicted RBP14.73□□□□□ -0.05
CLPX-203ENST00000558958 ABHD14BQ96IU4 210 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 KCNS2Q9ULS6 477 aa14.73□□□□□ -0.05
CLPX-203ENST00000558958 RNASEK-C17orf49H0YIS7 233 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 TOR1AO14656 332 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 HSD17B6O14756 317 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 SLC22A5O76082 557 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 PRRX1P54821 245 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 MSMO1Q15800 293 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 FAHD2BQ6P2I3 314 aaPredicted RBP14.72□□□□□ -0.05
CLPX-203ENST00000558958 ODF3L1Q8IXM7 274 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 BEND2Q8NDZ0 799 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 FAHD2AQ96GK7 314 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 GHITMQ9H3K2 345 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 C7orf69Q9H7B7 122 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 ZNF221Q9UK13 617 aa14.72□□□□□ -0.05
CLPX-203ENST00000558958 C14orf166Q9Y224 244 aaKnown RBP14.72□□□□□ -0.05
CLPX-203ENST00000558958 SETXQ7Z333 2677 aaKnown RBP14.71□□□□□ -0.05
CLPX-203ENST00000558958 J3QLI3 93 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 GPR31O00270 319 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 RAB29O14966 203 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 ZNF16P17020 682 aaPredicted RBP14.71□□□□□ -0.05
CLPX-203ENST00000558958 GPR12P47775 334 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 MECP2P51608 486 aaKnown RBP14.71□□□□□ -0.05
CLPX-203ENST00000558958 RAG2P55895 527 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 ZNF626Q68DY1 528 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 TMED4Q7Z7H5 227 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 LYG1Q8N1E2 194 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 DRAM1Q8N682 238 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 ADAD2Q8NCV1 583 aaKnown RBP14.71□□□□□ -0.05
CLPX-203ENST00000558958 BVESQ8NE79 360 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 OR10X1Q8NGY0 326 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 C5orf30Q96GV9 206 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 AKR1E2Q96JD6 320 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 SLC2A9Q9NRM0 540 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 PIPOXQ9P0Z9 390 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 GAB2Q9UQC2 676 aa14.71□□□□□ -0.05
CLPX-203ENST00000558958 ODF3BA8MYP8 253 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 INMT-MINDY4F8WBC2 141 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 PROP1O75360 226 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 PEX14O75381 377 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 RAB25P57735 213 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 HLA-DRB5Q30154 266 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 ABCA11PQ4W5N1 156 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 PHLDA2Q53GA4 152 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 CMTM1Q8IZ96 169 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.7□□□□□ -0.06
CLPX-203ENST00000558958 ZBTB34Q8NCN2 500 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 OR4P4Q8NGL7 312 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 LHX4Q969G2 390 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 ALX4Q9H161 411 aaPredicted RBP14.7□□□□□ -0.06
CLPX-203ENST00000558958 SDHAF2Q9NX18 166 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 ABCA1O95477 2261 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 TEX15Q9BXT5 2789 aa14.7□□□□□ -0.06
CLPX-203ENST00000558958 SAA2-SAA4A0A096LPE2 208 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 ARG1P05089 322 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 SAA2P0DJI9 122 aaPredicted RBP14.69□□□□□ -0.06
CLPX-203ENST00000558958 ANXA7P20073 488 aaKnown RBP14.69□□□□□ -0.06
CLPX-203ENST00000558958 UBE2E1P51965 193 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 PIGPP57054 158 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 RND3P61587 244 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 C1orf229Q6ZS94 237 aaPredicted RBP14.69□□□□□ -0.06
CLPX-203ENST00000558958 SLC25A42Q86VD7 318 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 PDZD9Q8IXQ8 264 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 TMEM230Q96A57 120 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 ZNF251Q9BRH9 671 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 SVEP1Q4LDE5 3571 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 CENPVL3A0A0U1RRI6 287 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 BUB1B-PAK6H3BSN5 160 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 PGLYRP1O75594 196 aaPredicted RBP14.69□□□□□ -0.06
CLPX-203ENST00000558958 AVPP01185 164 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 AKR1C4P17516 323 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 ZNF137PP52743 207 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 TAS2R31P59538 309 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 EIF4EBP1Q13541 118 aaPredicted RBP14.69□□□□□ -0.06
CLPX-203ENST00000558958 RPL39P5Q59GN2 51 aa14.69□□□□□ -0.06
CLPX-203ENST00000558958 ST6GALNAC6Q969X2 333 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms