RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 TRAV1-2A0A0B4J238 106 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 PSMB11A5LHX3 300 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 BET1O15155 118 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 RGS11O94810 467 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 MOSP00540 346 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 SAA2P0DJI9 122 aaPredicted RBP9.51□□□□□ -0.89
TPM1-216ENST00000558910 GADD45AP24522 165 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 PSMD7P51665 324 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 ID3Q02535 119 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 TCTEX1D4Q5JR98 221 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 DRAXINQ8NBI3 349 aaPredicted RBP9.51□□□□□ -0.89
TPM1-216ENST00000558910 OR4X2Q8NGF9 303 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 ST6GALNAC6Q969X2 333 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 JPT1Q9UK76 154 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
TPM1-216ENST00000558910 STUB1Q9UNE7 303 aa9.51□□□□□ -0.89
TPM1-216ENST00000558910 M0QZK8 103 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 RRP9O43818 475 aaKnown RBP9.5□□□□□ -0.89
TPM1-216ENST00000558910 NAPSAO96009 420 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 CD36P16671 472 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 TGFBR1P36897 503 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 LSM3P62310 102 aaKnown RBP9.5□□□□□ -0.89
TPM1-216ENST00000558910 LSAMPQ13449 338 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 ARFRP1Q13795 201 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 MMDQ15546 238 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 NDUFA11Q86Y39 141 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 FAM89BQ8N5H3 189 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 FCGR1BQ92637 280 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 S1PR3Q99500 378 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 YTHDF1Q9BYJ9 559 aaKnown RBP9.5□□□□□ -0.89
TPM1-216ENST00000558910 Q9N2K0 584 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 C12orf4Q9NQ89 552 aa9.5□□□□□ -0.89
TPM1-216ENST00000558910 FOXI3A8MTJ6 420 aaPredicted RBP9.49□□□□□ -0.89
TPM1-216ENST00000558910 NUDT19A8MXV4 375 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 H7C2Y5 167 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 LDLRAD4O15165 306 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 YPEL1O60688 119 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 MRPS14O60783 128 aaKnown RBP9.49□□□□□ -0.89
TPM1-216ENST00000558910 PF4P02776 101 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 FCER2P06734 321 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 CD37P11049 281 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 CD1BP29016 333 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 SDC2P34741 201 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 TALDO1P37837 337 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 LINC00205P59089 165 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 HTD2P86397 168 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 IGSF11Q5DX21 431 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 IDNKQ5T6J7 187 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 ZNF880Q6PDB4 577 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 CD200R1LQ6Q8B3 271 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 FAM131AQ6UXB0 335 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 MOB1BQ7L9L4 216 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 FOXRED2Q8IWF2 684 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 ODF3L1Q8IXM7 274 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 Q8N9W7 124 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 OR10R2Q8NGX6 335 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 DUX3Q96PT4 197 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 CLCC1Q96S66 551 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 NABP2Q9BQ15 211 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 HSPB9Q9BQS6 159 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 ZNF251Q9BRH9 671 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 KRTAP9-2Q9BYQ4 174 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 C11orf54Q9H0W9 315 aaPredicted RBP9.49□□□□□ -0.89
TPM1-216ENST00000558910 IFI27L2Q9H2X8 130 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 KCNK7Q9Y2U2 307 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 A3GALT2U3KPV4 340 aa9.49□□□□□ -0.89
TPM1-216ENST00000558910 IGKV1-6A0A0C4DH72 117 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 TRDCB7Z8K6 153 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 FGF16O43320 207 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 TXNL1O43396 289 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 LANCL1O43813 399 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 GSTT2P0CG29 244 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 GSTT2BP0CG30 244 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 GPR12P47775 334 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 ACTBP60709 375 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 CD83Q01151 205 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 PLGLAQ15195 96 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 Q3ZCU0 254 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 CDNFQ49AH0 187 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 STEAP3Q658P3 488 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 OR4F17Q8NGA8 305 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 LGALS14Q8TCE9 139 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 WIPF2Q8TF74 440 aaPredicted RBP9.48□□□□□ -0.89
TPM1-216ENST00000558910 ABHD5Q8WTS1 349 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 KCTD7Q96MP8 289 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 OR4F4Q96R69 305 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 CENPOQ9BU64 300 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 RIMS4Q9H426 269 aaPredicted RBP9.48□□□□□ -0.89
TPM1-216ENST00000558910 HSF4Q9ULV5 492 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 RBM7Q9Y580 266 aaKnown RBP9.48□□□□□ -0.89
TPM1-216ENST00000558910 TSSC4Q9Y5U2 329 aaPredicted RBP9.48□□□□□ -0.89
TPM1-216ENST00000558910 WSB1Q9Y6I7 421 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
TPM1-216ENST00000558910 METTL21EPA6NDL7 271 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms