RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CT45A6P0DMU7 189 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 CT45A5P0DMU8 189 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 CT45A7P0DMV0 189 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 MAPK3P27361 379 aaPredicted RBP10.51□□□□□ -0.73
VPS18-203ENST00000558855 CLDN12P56749 244 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 SPHARQ15513 63 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 LIPKQ5VXJ0 399 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 RNLSQ5VYX0 342 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 ZNF554Q86TJ5 538 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 NPBQ8NG41 125 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 OR5M8Q8NGP6 311 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 IL1F10Q8WWZ1 152 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 PHYHIPQ92561 330 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 NEDD4LQ96PU5 975 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 MND1Q9BWT6 205 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 GPR61Q9BZJ8 451 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 CST11Q9H112 138 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 TPSG1Q9NRR2 321 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 KCNIP1Q9NZI2 227 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 ERGIC3Q9Y282 383 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 STARD9Q9P2P6 4700 aa10.51□□□□□ -0.73
VPS18-203ENST00000558855 TRAV41A0A0B4J266 112 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 SRMP19623 302 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 ECI1P42126 302 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 TMEM50BP56557 158 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 MED22Q15528 200 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 HSD17B12Q53GQ0 312 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 LY6G6FQ5SQ64 297 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 MINDY2Q8NBR6 621 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 OR2AK2Q8NG84 335 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 SETD6Q8TBK2 473 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 GALMQ96C23 342 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 ASCL2Q99929 193 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 AGMATQ9BSE5 352 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 GHRLQ9UBU3 117 aa10.5□□□□□ -0.73
VPS18-203ENST00000558855 AK6Q9Y3D8 172 aaKnown RBP10.5□□□□□ -0.73
VPS18-203ENST00000558855 SHISA3A0PJX4 238 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 H0YJW9 148 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 SCTP09683 121 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 UBBP0CG47 229 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 MAP2K4P45985 399 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 SLURP1P55000 103 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 SSBP2P81877 361 aaPredicted RBP10.49□□□□□ -0.73
VPS18-203ENST00000558855 ECSCRQ19T08 205 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 ZNF260Q3ZCT1 412 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 C9orf66Q5T8R8 295 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 GLT8D1Q68CQ7 371 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 DRAXINQ8NBI3 349 aaPredicted RBP10.49□□□□□ -0.73
VPS18-203ENST00000558855 DCUN1D4Q92564 292 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 C5orf30Q96GV9 206 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 FAM103A1Q9BTL3 118 aaKnown RBP10.49□□□□□ -0.73
VPS18-203ENST00000558855 RAB9BQ9NP90 201 aa10.49□□□□□ -0.73
VPS18-203ENST00000558855 TRBV6-6A0A0A6YYG2 114 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 RRHO14718 337 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 BPNT1O95861 308 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 CD3GP09693 182 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 RAB9AP51151 201 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 CRIP2P52943 208 aaPredicted RBP10.48□□□□□ -0.73
VPS18-203ENST00000558855 CX3CL1P78423 397 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 RUNX1Q01196 453 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 FABP5Q01469 135 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 PLAC9Q5JTB6 97 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 LIN54Q6MZP7 749 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 FAM89BQ8N5H3 189 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 MS4A15Q8N5U1 240 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 OR6M1Q8NGM8 313 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 OR1N2Q8NGR9 330 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 THRSPQ92748 146 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 ARHGAP5-AS1Q96IT6 56 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 UBE2E2Q96LR5 201 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 GON7Q9BXV9 100 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 C11orf54Q9H0W9 315 aaPredicted RBP10.48□□□□□ -0.73
VPS18-203ENST00000558855 CHMP1AQ9HD42 196 aaPredicted RBP10.48□□□□□ -0.73
VPS18-203ENST00000558855 SLC23A1Q9UHI7 598 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 RNF150Q9ULK6 438 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 A3GALT2U3KPV4 340 aa10.48□□□□□ -0.73
VPS18-203ENST00000558855 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 A0A087WW49 117 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 A0A1W2PN81 502 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 SLC17A2O00624 439 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 IGKV1-16P04430 117 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 CHRNA7P36544 502 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 DEFA5Q01523 94 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 ZNF616Q08AN1 781 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 TPBGQ13641 420 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 MOGAT2Q3SYC2 334 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 FAM71F2Q6NXP2 309 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 ZNF383Q8NA42 475 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 DLX4Q92988 240 aaPredicted RBP10.47□□□□□ -0.73
VPS18-203ENST00000558855 WWC2-AS2Q96NR7 200 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 CLCC1Q96S66 551 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 PECRQ9BY49 303 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 DUSP21Q9H596 190 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 Q9N2K0 584 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 PLEKHJ1Q9NW61 149 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 VSIG4Q9Y279 399 aa10.47□□□□□ -0.73
VPS18-203ENST00000558855 KCNK7Q9Y2U2 307 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms