RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SELLP14151 372 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 ATP6V0CP27449 155 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 PLA2G5P39877 138 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 RPS16P62249 146 aaKnown RBP8.9□□□□□ -0.99
CUX1-217ENST00000558836 C1orf185Q5T7R7 199 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 ETV3LQ6ZN32 361 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 MOGAT3Q86VF5 341 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 MUCL1Q96DR8 90 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 AKR1E2Q96JD6 320 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 GINS3Q9BRX5 216 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 PLEKHF2Q9H8W4 249 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 TP53TG5Q9Y2B4 290 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 DCHS2Q6V1P9 2916 aa8.9□□□□□ -0.99
CUX1-217ENST00000558836 YLPM1P49750 1951 aaKnown RBP8.9□□□□□ -0.99
CUX1-217ENST00000558836 ST8SIA5O15466 376 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 DANCRP0C864 163 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 AKR1C3P42330 323 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 NPBWR1P48145 328 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 PPT1P50897 306 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 NUBP1P53384 320 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 F2RL1P55085 397 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 MOB1BQ7L9L4 216 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 TGIF2LYQ8IUE0 185 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 OR2G3Q8NGZ4 309 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 CACFD1Q9UGQ2 172 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 GLS2Q9UI32 602 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 EIF3GO75821 320 aaKnown RBP eCLIP8.89□□□□□ -0.99
CUX1-217ENST00000558836 LMO1P25800 156 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 PRDX2P32119 198 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 G6PCP35575 357 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 SMIM21Q3B7S5 101 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 UTF1Q5T230 341 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 MBNL2Q5VZF2 373 aaKnown RBP8.89□□□□□ -0.99
CUX1-217ENST00000558836 IL34Q6ZMJ4 242 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 ZCCHC24Q8N2G6 241 aaKnown RBP8.89□□□□□ -0.99
CUX1-217ENST00000558836 DEFB108BQ8NET1 73 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 ARV1Q9H2C2 271 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 PARP11Q9NR21 331 aa8.89□□□□□ -0.99
CUX1-217ENST00000558836 IGKV1D-17A0A075B6S4 117 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 KIAA1324LA8MWY0 1029 aaPredicted RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 C1QTNF9BB2RNN3 333 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 METTL15P1P0C7V9 234 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 PRR30Q53SZ7 412 aaPredicted RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 SPINK9Q5DT21 86 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 DUX4L9Q6RFH8 374 aaPredicted RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 SVBPQ8N300 66 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 FGFRL1Q8N441 504 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 NINJ1Q92982 152 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 EIF5A2Q9GZV4 153 aaKnown RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 FAM234AQ9H0X4 552 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 OOEPA6NGQ2 149 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 ATXN7O15265 892 aaPredicted RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 SEC11BP0C7V7 166 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 EDDM3BP56851 147 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 CCL20P78556 96 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 TIMM23BQ5SRD1 257 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 SHEQ5VZ18 495 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 FAM180AQ6UWF9 173 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 GCSAMQ8N6F7 178 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 LEAP2Q969E1 77 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 C19orf12Q9NSK7 152 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 PSG11Q9UQ72 335 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 FBXO7Q9Y3I1 522 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 CLEC18AA5D8T8 446 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 C17orf98A8MV24 154 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 NPIPB11E5RHQ5 1161 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 MKRN2OSH3BPM6 223 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 TOR1AO14656 332 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 PITX3O75364 302 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 MAJINQ3KP22 176 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 CLEC18CQ8NCF0 446 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 ITLN1Q8WWA0 313 aa8.88□□□□□ -0.99
CUX1-217ENST00000558836 MRPL37Q9BZE1 423 aaKnown RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 ASH1LQ9NR48 2969 aaKnown RBP8.88□□□□□ -0.99
CUX1-217ENST00000558836 ARFGEF3Q5TH69 2177 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 CRYABP02511 175 aaKnown RBP8.87□□□□□ -0.99
CUX1-217ENST00000558836 KLF3P57682 345 aaPredicted RBP8.87□□□□□ -0.99
CUX1-217ENST00000558836 BRWD1-AS2P59051 145 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 RELQ04864 619 aaPredicted RBP8.87□□□□□ -0.99
CUX1-217ENST00000558836 ARL16Q0P5N6 197 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 SLC35E4Q6ICL7 350 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 TCTEX1D2Q8WW35 142 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 C20orf24Q9BUV8 137 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 SCNM1Q9BWG6 230 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 SLC25A31Q9H0C2 315 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 A0A1B0GU03 582 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 A0A1W2PPE3 182 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 Q3ZCU0 254 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 SPANXN5Q5MJ07 72 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 DOLPP1Q86YN1 238 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 IL22RA2Q969J5 263 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 RARRES2Q99969 163 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 KCNJ16Q9NPI9 418 aa8.87□□□□□ -0.99
CUX1-217ENST00000558836 LIN7CQ9NUP9 197 aaKnown RBP8.87□□□□□ -0.99
CUX1-217ENST00000558836 A0A0G2JNJ9 132 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 DUXBA0A1W2PPF3 345 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 LINC00473A8K010 186 aa8.86□□□□□ -0.99
CUX1-217ENST00000558836 A8MXE2 369 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms