RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 IGHV3-43DP0DP04 118 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 C17orf58Q2M2W7 97 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 CLLU1Q5K131 121 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 UTF1Q5T230 341 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 HIST2H2BCQ6DN03 193 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 ALKAL2Q6UX46 152 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 OR8H3Q8N146 312 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 ZNF645Q8N7E2 425 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 INO80EQ8NBZ0 244 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-207ENST00000558763 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 ST8SIA2Q92186 375 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 C14orf79Q96F83 325 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 CCL13Q99616 98 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 RCL1Q9Y2P8 373 aaKnown RBP10.72□□□□□ -0.69
SMAD3-207ENST00000558763 B9A039 149 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 TMEM178BH3BS89 294 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 SPDEFO95238 335 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 GOSR1O95249 250 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 SOD3P08294 240 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 PET100P0DJ07 73 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 HKR1P10072 659 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 BRWD1-AS2P59051 145 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 ESCO2Q56NI9 601 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 ZNF695Q8IW36 515 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 FOXRED2Q8IWF2 684 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 DMBX1Q8NFW5 382 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 FAM234AQ9H0X4 552 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 OR2D2Q9H210 308 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 OR2S2Q9NQN1 319 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 KCNS2Q9ULS6 477 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 LAMP3Q9UQV4 416 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 AUP1Q9Y679 476 aa10.72□□□□□ -0.69
SMAD3-207ENST00000558763 LINC00862A6NCI5 91 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 LGALS8O00214 317 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 ADAM20O43506 726 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 GZMHP20718 246 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 VDAC1P21796 283 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 RPL30P62888 115 aaKnown RBP10.71□□□□□ -0.69
SMAD3-207ENST00000558763 TLE4Q04727 773 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 MSMO1Q15800 293 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 ZNF295-AS1Q8N0V1 137 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 SCARB1Q8WTV0 552 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 GSX2Q9BZM3 304 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 ZNF665Q9H7R5 613 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 RNF150Q9ULK6 438 aa10.71□□□□□ -0.69
SMAD3-207ENST00000558763 CSMD2Q7Z408 3487 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 KANTRA0A1W2PQU2 76 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 SPINT2O43291 252 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 PROP1O75360 226 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 DANCRP0C864 163 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 IRF2P14316 349 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 EDDM3BP56851 147 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 UBA52P62987 128 aaKnown RBP10.7□□□□□ -0.7
SMAD3-207ENST00000558763 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 ARPC5LQ9BPX5 153 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 EGLN1Q9GZT9 426 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 LINC00574Q9H8X3 128 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 TMEM106BQ9NUM4 274 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 CALYQ9NYX4 217 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 JPT1Q9UK76 154 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 LSM5Q9Y4Y9 91 aaKnown RBP10.7□□□□□ -0.7
SMAD3-207ENST00000558763 AKAP6Q13023 2319 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 LRRC30A6NM36 301 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 PITX3O75364 302 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 SCGB1D2O95969 90 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 IGKV1-5P01602 117 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 NMBP08949 121 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 MORN2Q502X0 79 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 ZBTB34Q8NCN2 500 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 MS4A5Q9H3V2 200 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 CBLN4Q9NTU7 201 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 LIN7CQ9NUP9 197 aaKnown RBP10.7□□□□□ -0.7
SMAD3-207ENST00000558763 OR6C3Q9NZP0 311 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 RBM7Q9Y580 266 aaKnown RBP10.7□□□□□ -0.7
SMAD3-207ENST00000558763 POMT1Q9Y6A1 747 aa10.7□□□□□ -0.7
SMAD3-207ENST00000558763 HECTD1Q9ULT8 2610 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 KIAA1324LA8MWY0 1029 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-207ENST00000558763 ST8SIA5O15466 376 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 YPEL1O60688 119 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 OMGP23515 440 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 S100GP29377 79 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF134P52741 427 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 Q6ZRM9 215 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 NINJ1Q92982 152 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 MARVELD3Q96A59 401 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 ABHD14BQ96IU4 210 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF471Q9BX82 626 aaPredicted RBP10.69□□□□□ -0.7
SMAD3-207ENST00000558763 PLEKHF2Q9H8W4 249 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 SDHAF2Q9NX18 166 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 ABCA12Q86UK0 2595 aa10.69□□□□□ -0.7
SMAD3-207ENST00000558763 YLPM1P49750 1951 aaKnown RBP10.69□□□□□ -0.7
SMAD3-207ENST00000558763 TRAV38-1A0A0B4J264 116 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 KBTBD11-OT1A0A1B0GTJ5 212 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 RAMP3O60896 148 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 ID3Q02535 119 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 LTC4SQ16873 150 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 CXorf66Q5JRM2 361 aaPredicted RBP10.68□□□□□ -0.7
SMAD3-207ENST00000558763 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
SMAD3-207ENST00000558763 C11orf71Q6IPW1 123 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms