RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 ABHD14BQ96IU4 210 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 TOLLIPQ9H0E2 274 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 RNF150Q9ULK6 438 aa10□□□□□ -0.81
LRRC28-206ENST00000558471 SAA2-SAA4A0A096LPE2 208 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 CLPSL1A2RUU4 121 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 ZNF736B4DX44 427 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-206ENST00000558471 TXNL1O43396 289 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 NOL3O60936 208 aaKnown RBP9.99□□□□□ -0.81
LRRC28-206ENST00000558471 DIRAS3O95661 229 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 IGKV1D-33P01593 117 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 IGKV1-33P01594 117 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 HLA-DQB1P01920 261 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 LPLP06858 475 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 SAA2P0DJI9 122 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-206ENST00000558471 SOX6P35712 828 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 BLCAPP62952 87 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 HNF4GQ14541 408 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 ZNF833PQ6ZTB9 187 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 RBM14Q96PK6 669 aaKnown RBP9.99□□□□□ -0.81
LRRC28-206ENST00000558471 ZNF251Q9BRH9 671 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 SLC25A33Q9BSK2 321 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 NPFFR1Q9GZQ6 430 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 C16orf95Q9H693 158 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 BEX1Q9HBH7 125 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 PIPOXQ9P0Z9 390 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 ANXA10Q9UJ72 324 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 MRPS7Q9Y2R9 242 aaKnown RBP9.99□□□□□ -0.81
LRRC28-206ENST00000558471 MMP24Q9Y5R2 645 aa9.99□□□□□ -0.81
LRRC28-206ENST00000558471 TENM1Q9UKZ4 2725 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 A0A1B0GUS0 222 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 SMIM31A0A1B0GVY4 71 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 MEIS3P1A6NDR6 274 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 FAM25AB3EWG3 89 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 FAM25CB3EWG5 89 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 FAM25GB3EWG6 89 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 CTDSP2O14595 271 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 RAB29O14966 203 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 PROP1O75360 226 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 OR2F2O95006 317 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 FCER2P06734 321 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 CD1BP29016 333 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 EBI3Q14213 229 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 HES1Q14469 280 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 RPL39P5Q59GN2 51 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 CNIH2Q6PI25 160 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 Q6ZS46 218 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 C16orf82Q7Z2V1 217 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 HOGA1Q86XE5 327 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 C3orf56Q8N813 242 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 BEST4Q8NFU0 473 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 EAF1Q96JC9 268 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-206ENST00000558471 NABP2Q9BQ15 211 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 GINS4Q9BRT9 223 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 MRPL20Q9BYC9 149 aaKnown RBP9.98□□□□□ -0.81
LRRC28-206ENST00000558471 RBM38Q9H0Z9 239 aaKnown RBP9.98□□□□□ -0.81
LRRC28-206ENST00000558471 GHITMQ9H3K2 345 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 RANBP3Q9H6Z4 567 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-206ENST00000558471 SIGLEC9Q9Y336 463 aa9.98□□□□□ -0.81
LRRC28-206ENST00000558471 CCDC160A6NGH7 325 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 AMY1AP04745 511 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 AMY2AP04746 511 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 CTXN2P0C2S0 81 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 OR8U9P0C7N5 309 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 TMEM11P17152 192 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 PRSS3P35030 304 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 CBX5P45973 191 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-206ENST00000558471 OR4C13Q8NGP0 309 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 OR8U1Q8NH10 309 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 S1PR3Q99500 378 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 MIXL1Q9H2W2 232 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 CCDC59Q9P031 241 aaKnown RBP9.97□□□□□ -0.81
LRRC28-206ENST00000558471 RNF114Q9Y508 228 aa9.97□□□□□ -0.81
LRRC28-206ENST00000558471 RGS5O15539 181 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 CT45A6P0DMU7 189 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 CT45A5P0DMU8 189 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 CT45A7P0DMV0 189 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 NFYAP23511 347 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-206ENST00000558471 GPR12P47775 334 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 PROK1P58294 105 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 LSAMPQ13449 338 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 FAM71F2Q6NXP2 309 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 SNX29P2Q8IUI4 249 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 Q8N6K4 173 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 OR2T10Q8NGZ9 312 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 SNAPC3Q92966 411 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 AKR1E2Q96JD6 320 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF747Q9BV97 191 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 PRSS22Q9GZN4 317 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 SLIRPQ9GZT3 109 aaKnown RBP9.96□□□□□ -0.82
LRRC28-206ENST00000558471 EXTL2Q9UBQ6 330 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 RSL24D1Q9UHA3 163 aaKnown RBP9.96□□□□□ -0.82
LRRC28-206ENST00000558471 ZNF221Q9UK13 617 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 GAB2Q9UQC2 676 aa9.96□□□□□ -0.82
LRRC28-206ENST00000558471 SH2D7A6NKC9 451 aaPredicted RBP9.95□□□□□ -0.82
LRRC28-206ENST00000558471 J3QRK9 145 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 HAX1O00165 279 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 MOSP00540 346 aa9.95□□□□□ -0.82
LRRC28-206ENST00000558471 LINC00205P59089 165 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms