RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 TECTBQ96PL2 329 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 MIEN1Q9BRT3 115 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 RTBDNQ9BSG5 229 aaPredicted RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 TMEM59Q9BXS4 323 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 SNHG12Q9BXW3 62 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 TXNIPQ9H3M7 391 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 PLEKHF2Q9H8W4 249 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 NGBQ9NPG2 151 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 GPR173Q9NS66 373 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 FKBP11Q9NYL4 201 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 NAT8Q9UHE5 227 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 AK3Q9UIJ7 227 aa6.84□□□□□ -1.31
RTF1-205ENST00000558298 CHTOPQ9Y3Y2 248 aaKnown RBP6.84□□□□□ -1.31
RTF1-205ENST00000558298 PRRC2AP48634 2157 aaKnown RBP6.84□□□□□ -1.32
RTF1-205ENST00000558298 TRAV39A0A0B4J263 110 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 PRSS37A4D1T9 235 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 RNF212BA8MTL3 300 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 TMEM250H0YL14 139 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 K7EP13 123 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 SIAH2O43255 324 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 IGKV3-15P01624 115 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 IGHG1P01857 330 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 HLA-HP01893 362 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 HLA-DQA2P01906 255 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 DTYMKP23919 212 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ZNF93P35789 620 aaPredicted RBP6.83□□□□□ -1.32
RTF1-205ENST00000558298 UCP3P55916 312 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 CLDN17P56750 224 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 TAS2R30P59541 319 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ERVFRD-1P60508 538 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 IL24Q13007 206 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ARFRP1Q13795 201 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 PCK2Q16822 640 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ABCA11PQ4W5N1 156 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 LEMD1Q68G75 181 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ZNF774Q6NX45 483 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 TOMM20LQ6UXN7 152 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 THNSL2Q86YJ6 484 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 FAM219AQ8IW50 185 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 PRR18Q8N4B5 295 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 CSNK2A3Q8NEV1 391 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 OR4B1Q8NGF8 309 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 OR1K1Q8NGR3 316 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ZNF519Q8TB69 540 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 C10orf35Q96D05 121 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 MBD6Q96DN6 1003 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 SNX22Q96L94 193 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 ALKBH3Q96Q83 286 aaPredicted RBP6.83□□□□□ -1.32
RTF1-205ENST00000558298 KCNK17Q96T54 332 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 GAB2Q9UQC2 676 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 SLC25A15Q9Y619 301 aa6.83□□□□□ -1.32
RTF1-205ENST00000558298 HEATR1Q9H583 2144 aaKnown RBP6.83□□□□□ -1.32
RTF1-205ENST00000558298 F8P00451 2351 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 LOC102723971A0A1B0GUV8 181 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 MAP1LC3B2A6NCE7 125 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 HSBP1L1C9JCN9 74 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 CIDEAO60543 219 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 IFNA5P01569 189 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 IGLV1-44P01699 117 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 CXCL1P09341 107 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 VSIG8P0DPA2 414 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 HLA-DOBP13765 273 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 UCP1P25874 307 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 G0S2P27469 103 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 RPL27P61353 136 aaKnown RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 MRPS11P82912 194 aaKnown RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 SERF2P84101 59 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 ICAM4Q14773 271 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 OR8B8Q15620 311 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 ACKR1Q16570 336 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 COX19Q49B96 90 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 ALKBH2Q6NS38 261 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 CYP2G1PQ6ZSU1 146 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 FOXL2NBQ6ZUU3 175 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 C22orf34Q6ZV56 151 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 CENPVQ7Z7K6 275 aaPredicted RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 FOXRED2Q8IWF2 684 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 FBXL14Q8N1E6 418 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 FAM89BQ8N5H3 189 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 OR2C3Q8N628 320 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 OR56B2PQ8NGI1 322 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 OR51A4Q8NGJ6 313 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 CLDND2Q8NHS1 167 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 LINC01560Q8TB33 94 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 ABHD5Q8WTS1 349 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 NPRL2Q8WTW4 380 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 IGFBPL1Q8WX77 278 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 ZNF775Q96BV0 537 aaPredicted RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 MOB3AQ96BX8 217 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 PSMG3Q9BT73 122 aaPredicted RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 MAP1LC3BQ9GZQ8 125 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 OR10A2Q9H208 303 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 CXXC4Q9H2H0 198 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 NAA60Q9H7X0 242 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 GPR35Q9HC97 309 aa6.82□□□□□ -1.32
RTF1-205ENST00000558298 SRA1Q9HD15 236 aaKnown RBP6.82□□□□□ -1.32
RTF1-205ENST00000558298 NECAP2Q9NVZ3 263 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms