RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 UBE2E1P51965 193 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 MIDNQ504T8 468 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 TMEM128Q5BJH2 165 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 MINOS1Q5TGZ0 78 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 CCDC144NLQ6NUI1 221 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 CCBE1Q6UXH8 406 aaPredicted RBP10.15□□□□□ -0.78
TPM1-209ENST00000558072 ZNF66Q6ZN08 573 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 VMO1Q7Z5L0 202 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 SGPP2Q8IWX5 399 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 BVESQ8NE79 360 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 OR13C8Q8NGS7 320 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 UBALD1Q8TB05 177 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 MARCH1Q8TCQ1 289 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 HSD17B10Q99714 261 aaKnown RBP10.15□□□□□ -0.78
TPM1-209ENST00000558072 TMPRSS13Q9BYE2 586 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 C20orf85Q9H1P6 137 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 MMP28Q9H239 520 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 OCEL1Q9H607 264 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 C7orf69Q9H7B7 122 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 MMP26Q9NRE1 261 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 NUDT15Q9NV35 164 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 KCNS2Q9ULS6 477 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 TBL2Q9Y4P3 447 aaKnown RBP10.15□□□□□ -0.78
TPM1-209ENST00000558072 MINOS1-NBL1R4GNA1 71 aa10.15□□□□□ -0.78
TPM1-209ENST00000558072 YLPM1P49750 1951 aaKnown RBP10.14□□□□□ -0.79
TPM1-209ENST00000558072 LEUTXA8MZ59 168 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 IL5P05113 134 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 HTR1DP28221 377 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 KIR2DS2P43631 304 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 MECP2P51608 486 aaKnown RBP10.14□□□□□ -0.79
TPM1-209ENST00000558072 ZNF137PP52743 207 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 SRPXP78539 464 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 PRB3Q04118 309 aaPredicted RBP10.14□□□□□ -0.79
TPM1-209ENST00000558072 CBX3Q13185 183 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 CT45A1Q5HYN5 189 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 GPR157Q5UAW9 335 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 C5orf24Q7Z6I8 188 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 Q8N7P7 452 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 ZNF439Q8NDP4 499 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 CT45A3Q8NHU0 189 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 CD300LFQ8TDQ1 290 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 UPRTQ96BW1 309 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 MSI2Q96DH6 328 aaKnown RBP10.14□□□□□ -0.79
TPM1-209ENST00000558072 AGMATQ9BSE5 352 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 PCGF1Q9BSM1 259 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 FAM212BQ9NTI7 297 aaPredicted RBP10.14□□□□□ -0.79
TPM1-209ENST00000558072 PRELID3BQ9Y3B1 194 aa10.14□□□□□ -0.79
TPM1-209ENST00000558072 ARHGAP32A7KAX9 2087 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 TEX13DA0A0J9YY54 714 aaPredicted RBP10.13□□□□□ -0.79
TPM1-209ENST00000558072 ARPC1BO15143 372 aaKnown RBP10.13□□□□□ -0.79
TPM1-209ENST00000558072 ST8SIA5O15466 376 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 MMP23AO75900 390 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 ATG12O94817 140 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 GAPDHP04406 335 aaKnown RBP10.13□□□□□ -0.79
TPM1-209ENST00000558072 RRASP10301 218 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 MMP9P14780 707 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 FOSL1P15407 271 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 ZNF16P17020 682 aaPredicted RBP10.13□□□□□ -0.79
TPM1-209ENST00000558072 GNRHRP30968 328 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 GNG10P50151 68 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 DLX1P56177 255 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 PIGPP57054 158 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 SCGB2A2Q13296 93 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 GNMTQ14749 295 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 HLA-DRB5Q30154 266 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 ZNF626Q68DY1 528 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 SPNS3Q6ZMD2 512 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 SLC25A42Q86VD7 318 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 LYG1Q8N1E2 194 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 PNKDQ8N490 385 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 SMR3AQ99954 134 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 AIFM2Q9BRQ8 373 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 FXYD6Q9H0Q3 95 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 SLC2A9Q9NRM0 540 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 LIN7CQ9NUP9 197 aaKnown RBP10.13□□□□□ -0.79
TPM1-209ENST00000558072 DPM3Q9P2X0 92 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 VPS13CQ709C8 3753 aa10.13□□□□□ -0.79
TPM1-209ENST00000558072 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
TPM1-209ENST00000558072 TRAV6A0A075B6T7 132 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 SNRPGP15A8MWD9 76 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 HSD17B6O14756 317 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 IGLV1-47P01700 117 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 ARG1P05089 322 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 RPA2P15927 270 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 MC5RP33032 325 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 THBS3P49746 956 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 DHODHQ02127 395 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 TMED4Q7Z7H5 227 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 RTN4IP1Q8WWV3 396 aaPredicted RBP10.12□□□□□ -0.79
TPM1-209ENST00000558072 RPEQ96AT9 228 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 MALSU1Q96EH3 234 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 IFI27L2Q9H2X8 130 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 C5orf66Q9H5L9 145 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 SIRT7Q9NRC8 400 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 CCL28Q9NRJ3 127 aa10.12□□□□□ -0.79
TPM1-209ENST00000558072 FLNBO75369 2602 aaKnown RBP10.12□□□□□ -0.79
TPM1-209ENST00000558072 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
TPM1-209ENST00000558072 IGKV1D-13A0A0B4J2D9 117 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms