RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SIRPDQ9H106 197 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 IFI27L2Q9H2X8 130 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 PIPOXQ9P0Z9 390 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 RNF150Q9ULK6 438 aa13.79□□□□□ -0.2
SNX1-203ENST00000558040 TEX13DA0A0J9YY54 714 aaPredicted RBP13.78□□□□□ -0.2
SNX1-203ENST00000558040 RAB29O14966 203 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 SLC31A2O15432 143 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 IL3RAP26951 378 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 ZNF134P52741 427 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 PAX8Q06710 450 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 LDLRAD3Q86YD5 345 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 SGPP2Q8IWX5 399 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 DRAM1Q8N682 238 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 ADAD2Q8NCV1 583 aaKnown RBP13.78□□□□□ -0.2
SNX1-203ENST00000558040 OR10X1Q8NGY0 326 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 ZNF596Q8TC21 504 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 TMEM186Q96B77 213 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 ABHD14BQ96IU4 210 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 BEX2Q9BXY8 128 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 BEX1Q9HBH7 125 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 SIRT7Q9NRC8 400 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 GAB2Q9UQC2 676 aa13.78□□□□□ -0.2
SNX1-203ENST00000558040 AMMECR1Q9Y4X0 333 aaPredicted RBP13.78□□□□□ -0.2
SNX1-203ENST00000558040 A0A1W2PPE3 182 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 RNF212BA8MTL3 300 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 OR4E1P0C645 316 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 MMP9P14780 707 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 COX7A1P24310 79 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 APCP25054 2843 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 TMEM249Q2WGJ8 235 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 UTF1Q5T230 341 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 GLDNQ6ZMI3 551 aaPredicted RBP13.77□□□□□ -0.21
SNX1-203ENST00000558040 PNKDQ8N490 385 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 BEND2Q8NDZ0 799 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 RTN4IP1Q8WWV3 396 aaPredicted RBP13.77□□□□□ -0.21
SNX1-203ENST00000558040 S1PR3Q99500 378 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 PCGF1Q9BSM1 259 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 POLQO75417 2590 aa13.77□□□□□ -0.21
SNX1-203ENST00000558040 CRYM-AS1A6NIL9 109 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 IGLV2-14P01704 120 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 HLA-AP01891 365 aaKnown RBP13.76□□□□□ -0.21
SNX1-203ENST00000558040 IGHV4-31P0DP07 118 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 VSIG10L2P0DP72 767 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 ANXA3P12429 323 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 VAMP1P23763 118 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 DHODHQ02127 395 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 LYG2Q86SG7 212 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 MAPK1IP1LQ8NDC0 245 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 OR11H6Q8NGC7 330 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 CAPSLQ8WWF8 208 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 TMEM230Q96A57 120 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 NAA60Q9H7X0 242 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 SDHAF2Q9NX18 166 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 KCNIP3Q9Y2W7 256 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 UNC79Q9P2D8 2635 aa13.76□□□□□ -0.21
SNX1-203ENST00000558040 SAA2-SAA4A0A096LPE2 208 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 C7orf66A4D0T2 115 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 SNRPGP15A8MWD9 76 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 J3QLI3 93 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 MPPED1O15442 326 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 CREBL2O60519 120 aaPredicted RBP13.75□□□□□ -0.21
SNX1-203ENST00000558040 PGLYRP1O75594 196 aaPredicted RBP13.75□□□□□ -0.21
SNX1-203ENST00000558040 B3GALNT1O75752 331 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 SAA2P0DJI9 122 aaPredicted RBP13.75□□□□□ -0.21
SNX1-203ENST00000558040 HOXB4P17483 251 aaPredicted RBP13.75□□□□□ -0.21
SNX1-203ENST00000558040 CATR1Q13166 79 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 DHRS2Q13268 280 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 PPP1R1AQ13522 171 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 HLA-DRB5Q30154 266 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 CYB5R2Q6BCY4 276 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 FAM71F2Q6NXP2 309 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 ZNF66Q6ZN08 573 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 KCTD9Q7L273 389 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 TBC1D26Q86UD7 250 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 MSI2Q96DH6 328 aaKnown RBP13.75□□□□□ -0.21
SNX1-203ENST00000558040 TBX15Q96SF7 602 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 HSD17B10Q99714 261 aaKnown RBP13.75□□□□□ -0.21
SNX1-203ENST00000558040 SEC22CQ9BRL7 303 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 ITGB1BP2Q9UKP3 347 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 ALG5Q9Y673 324 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 AUP1Q9Y679 476 aa13.75□□□□□ -0.21
SNX1-203ENST00000558040 A0A0B4J293 547 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 C9orf170A2RU37 121 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 TNFSF12O43508 249 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 SFT2D2O95562 160 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 TGFAP01135 160 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 IFNA2P01563 188 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 IGLV1-47P01700 117 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 ARG1P05089 322 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 ZNF137PP52743 207 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 DLX1P56177 255 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 CBX3Q13185 183 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 ZNF626Q68DY1 528 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 ODF3L1Q8IXM7 274 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 ZNF431Q8TF32 576 aaPredicted RBP13.74□□□□□ -0.21
SNX1-203ENST00000558040 GALNT14Q96FL9 552 aa13.74□□□□□ -0.21
SNX1-203ENST00000558040 LIN7CQ9NUP9 197 aaKnown RBP13.74□□□□□ -0.21
SNX1-203ENST00000558040 CENPEQ02224 2701 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms