RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ZNF221Q9UK13 617 aa17.18■□□□□ 0.34
CASC4-204ENST00000557945 RBMX2Q9Y388 322 aaKnown RBP17.18■□□□□ 0.34
CASC4-204ENST00000557945 OR2W1Q9Y3N9 320 aa17.18■□□□□ 0.34
CASC4-204ENST00000557945 OOSP1A8MZH6 123 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 RAB29O14966 203 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 LANCL1O43813 399 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 GAPDHP04406 335 aaKnown RBP17.17■□□□□ 0.34
CASC4-204ENST00000557945 CSF1P09603 554 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 AADACP22760 399 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 GPR12P47775 334 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 ARHGDIBP52566 201 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 TSPAN5P62079 268 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 BAMBIQ13145 260 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 TUSC1Q2TAM9 212 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 RNASE10Q5GAN6 216 aaKnown RBP17.17■□□□□ 0.34
CASC4-204ENST00000557945 CCDC144NLQ6NUI1 221 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 ODF3L1Q8IXM7 274 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 ST6GALNAC6Q969X2 333 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 AGMATQ9BSE5 352 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 PRDM13Q9H4Q3 707 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 ABCB10Q9NRK6 738 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 PIPOXQ9P0Z9 390 aa17.17■□□□□ 0.34
CASC4-204ENST00000557945 SAA2-SAA4A0A096LPE2 208 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 TUSC2O75896 110 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 IFNA2P01563 188 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 IFNA6P05013 189 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 SAA2P0DJI9 122 aaPredicted RBP17.16■□□□□ 0.34
CASC4-204ENST00000557945 LUMP51884 338 aaPredicted RBP17.16■□□□□ 0.34
CASC4-204ENST00000557945 ZNF137PP52743 207 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 STEAP1BQ6NZ63 245 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 LDLRAD3Q86YD5 345 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 TGIF2LXQ8IUE1 241 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 MFSD4AQ8N468 514 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 GDPD1Q8N9F7 314 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 S1PR3Q99500 378 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 SSX3Q99909 188 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 OR2D2Q9H210 308 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 GHITMQ9H3K2 345 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 AKIP1Q9NQ31 210 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 TNFRSF19Q9NS68 423 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 ZNF107Q9UII5 783 aaPredicted RBP17.16■□□□□ 0.34
CASC4-204ENST00000557945 MXRA5Q9NR99 2828 aa17.16■□□□□ 0.34
CASC4-204ENST00000557945 HOXA3O43365 443 aaPredicted RBP17.15■□□□□ 0.34
CASC4-204ENST00000557945 RAB3DO95716 219 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 PPYP01298 95 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 TBPP20226 339 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 RAB13P51153 203 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 FXYD4P59646 89 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 HERV-K104P61576 105 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 LRRC75BQ2VPJ9 315 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 RPL39P5Q59GN2 51 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 VAX1Q5SQQ9 334 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 MOB3BQ86TA1 216 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 OR6F1Q8NGZ6 308 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 GIMAP1Q8WWP7 306 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 RTN4IP1Q8WWV3 396 aaPredicted RBP17.15■□□□□ 0.34
CASC4-204ENST00000557945 S100ZQ8WXG8 99 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 DUX5Q96PT3 197 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 ZNF2Q9BSG1 426 aaPredicted RBP17.15■□□□□ 0.34
CASC4-204ENST00000557945 TINAGL1Q9GZM7 467 aaPredicted RBP17.15■□□□□ 0.34
CASC4-204ENST00000557945 IGKV1D-13A0A0B4J2D9 117 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 BTBD17A6NE02 478 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 H3BUX3 64 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 TCF21O43680 179 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 IGHV4-59P01825 116 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 IGKV1-13P0DP09 117 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 BRS3P32247 399 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 ZNF816Q0VGE8 651 aaPredicted RBP17.15■□□□□ 0.34
CASC4-204ENST00000557945 DHRS11Q6UWP2 260 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 OR8H3Q8N146 312 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 FAM216AQ8WUB2 273 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 SSMEM1Q8WWF3 244 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 JMJD8Q96S16 334 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 DPAGT1Q9H3H5 408 aa17.15■□□□□ 0.34
CASC4-204ENST00000557945 IGHV1-3A0A0C4DH29 117 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 A0A1W2PPI3 338 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 ANKRD20A5PA0PJZ0 165 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 TIMM23O14925 209 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 CD74P04233 296 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 IER3P46695 156 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 INPP1P49441 399 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 HILS1P60008 231 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 TRIQKQ629K1 86 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 ZNF833PQ6ZTB9 187 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 DRAM1Q8N682 238 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 OR4D10Q8NGI6 311 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 SECTM1Q8WVN6 248 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 TRIM63Q969Q1 353 aa17.14■□□□□ 0.33
CASC4-204ENST00000557945 DNAJC9-AS1A6NH13 148 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 VGLL3A8MV65 326 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 TXNL1O43396 289 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 AKAIN1P0CW23 69 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 MEF2DQ14814 521 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 BAK1Q16611 211 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 AANATQ16613 207 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 FAM71F2Q6NXP2 309 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 TMEM17Q86X19 198 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 TOMM5Q8N4H5 51 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 OR56B4Q8NH76 319 aa17.13■□□□□ 0.33
CASC4-204ENST00000557945 SDHCQ99643 169 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms