RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 CRYBA1P05813 215 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 ARPC4P59998 168 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 ACTG1P63261 375 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 MOB3BQ86TA1 216 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 OR56B4Q8NH76 319 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 SCPEP1Q9HB40 452 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 PIPOXQ9P0Z9 390 aa20.53■□□□□ 0.88
SMAD6-202ENST00000557916 COL6A5A8TX70 2615 aa20.52■□□□□ 0.88
SMAD6-202ENST00000557916 A6NDX4 124 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 RAB29O14966 203 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 TXNL1O43396 289 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 TPPPO94811 219 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 OR3A3P47888 321 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 RPL15P61313 204 aaKnown RBP20.52■□□□□ 0.87
SMAD6-202ENST00000557916 CCBE1Q6UXH8 406 aaPredicted RBP20.52■□□□□ 0.87
SMAD6-202ENST00000557916 LIAT1Q6ZQX7 453 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 GPX8Q8TED1 209 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 CAPSLQ8WWF8 208 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 CFHR4Q92496 578 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 SNAPC3Q92966 411 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 DIRAS2Q96HU8 199 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 ABHD14BQ96IU4 210 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 GHITMQ9H3K2 345 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 RNF150Q9ULK6 438 aa20.52■□□□□ 0.87
SMAD6-202ENST00000557916 SAA2-SAA4A0A096LPE2 208 aa20.51■□□□□ 0.87
SMAD6-202ENST00000557916 SAA2P0DJI9 122 aaPredicted RBP20.51■□□□□ 0.87
SMAD6-202ENST00000557916 FOXB2Q5VYV0 432 aa20.51■□□□□ 0.87
SMAD6-202ENST00000557916 TMEM219Q86XT9 240 aa20.51■□□□□ 0.87
SMAD6-202ENST00000557916 H1FOOQ8IZA3 346 aaPredicted RBP20.51■□□□□ 0.87
SMAD6-202ENST00000557916 C15orf40Q8WUR7 153 aa20.51■□□□□ 0.87
SMAD6-202ENST00000557916 DHRS7BQ6IAN0 325 aaPredicted RBP20.5■□□□□ 0.87
SMAD6-202ENST00000557916 ZNF833PQ6ZTB9 187 aa20.5■□□□□ 0.87
SMAD6-202ENST00000557916 TAF15Q92804 592 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMAD6-202ENST00000557916 S1PR3Q99500 378 aa20.5■□□□□ 0.87
SMAD6-202ENST00000557916 MMP27Q9H306 513 aa20.5■□□□□ 0.87
SMAD6-202ENST00000557916 RAB18Q9NP72 206 aa20.5■□□□□ 0.87
SMAD6-202ENST00000557916 ANAPC10Q9UM13 185 aa20.5■□□□□ 0.87
SMAD6-202ENST00000557916 FAM90A9PA6NNJ1 464 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 SULT1C2O00338 296 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 SNRNP70P08621 437 aaKnown RBP20.49■□□□□ 0.87
SMAD6-202ENST00000557916 OR8U9P0C7N5 309 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 FAM106CPP0CH98 169 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 HKR1P10072 659 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 HABP2Q14520 560 aaPredicted RBP20.49■□□□□ 0.87
SMAD6-202ENST00000557916 THNSL2Q86YJ6 484 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 OR8U1Q8NH10 309 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 ABHD1Q96SE0 405 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 NECAP2Q9NVZ3 263 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 ZNF221Q9UK13 617 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 A3GALT2U3KPV4 340 aa20.49■□□□□ 0.87
SMAD6-202ENST00000557916 IGHV3-72A0A0B4J1Y9 119 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 CHST1O43916 411 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 NAT1P18440 290 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 NFYAP23511 347 aaPredicted RBP20.48■□□□□ 0.87
SMAD6-202ENST00000557916 GPR12P47775 334 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 RPL39P5Q59GN2 51 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 FAM71F2Q6NXP2 309 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 OR5AP2Q8NGF4 316 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 ZNF251Q9BRH9 671 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 C1RLQ9NZP8 487 aa20.48■□□□□ 0.87
SMAD6-202ENST00000557916 RBM7Q9Y580 266 aaKnown RBP20.48■□□□□ 0.87
SMAD6-202ENST00000557916 TNFSF8P32971 234 aa20.47■□□□□ 0.87
SMAD6-202ENST00000557916 HES1Q14469 280 aa20.47■□□□□ 0.87
SMAD6-202ENST00000557916 FBLN7Q53RD9 439 aa20.47■□□□□ 0.87
SMAD6-202ENST00000557916 RNASE12Q5GAN4 147 aaKnown RBP20.47■□□□□ 0.87
SMAD6-202ENST00000557916 MRPL20Q9BYC9 149 aaKnown RBP20.47■□□□□ 0.87
SMAD6-202ENST00000557916 CD1BP29016 333 aa20.46■□□□□ 0.87
SMAD6-202ENST00000557916 IL18Q14116 193 aa20.46■□□□□ 0.87
SMAD6-202ENST00000557916 NABP2Q9BQ15 211 aa20.46■□□□□ 0.87
SMAD6-202ENST00000557916 OR2D2Q9H210 308 aa20.46■□□□□ 0.87
SMAD6-202ENST00000557916 OR2W1Q9Y3N9 320 aa20.46■□□□□ 0.87
SMAD6-202ENST00000557916 TMEM89A2RUT3 159 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 IGKV1D-33P01593 117 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 IGKV1-33P01594 117 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 OR5H8P0DN80 308 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 RELBQ01201 579 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 HNF4GQ14541 408 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 CDK10Q15131 360 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 OR52I2Q8NH67 350 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 RABL2AQ9UBK7 228 aaPredicted RBP20.45■□□□□ 0.86
SMAD6-202ENST00000557916 RABL2BQ9UNT1 228 aa20.45■□□□□ 0.86
SMAD6-202ENST00000557916 ZNF736B4DX44 427 aaPredicted RBP20.44■□□□□ 0.86
SMAD6-202ENST00000557916 J3QRK9 145 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 S100A5P33763 92 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 RCVRNP35243 200 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 TAS2R46P59540 309 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 LSAMPQ13449 338 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 PYHIN1Q6K0P9 492 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 LYSMD2Q8IV50 215 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.44■□□□□ 0.86
SMAD6-202ENST00000557916 RBM14Q96PK6 669 aaKnown RBP20.44■□□□□ 0.86
SMAD6-202ENST00000557916 GAB2Q9UQC2 676 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 PROP1O75360 226 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 TUSC2O75896 110 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 OR2F2O95006 317 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 NDUFA7O95182 113 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 PMP2P02689 132 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 TMEM11P17152 192 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 HLA-DMAP28067 261 aa20.44■□□□□ 0.86
SMAD6-202ENST00000557916 FCGR2CP31995 323 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms