RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HACD4Q5VWC8 232 aa9.97□□□□□ -0.81
SLIRP-211ENST00000557623 FAM71F2Q6NXP2 309 aa9.97□□□□□ -0.81
SLIRP-211ENST00000557623 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
SLIRP-211ENST00000557623 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
SLIRP-211ENST00000557623 IGHV3-72A0A0B4J1Y9 119 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 FABP7O15540 132 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 MOSP00540 346 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 VSIG10L2P0DP72 767 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 TGFBR1P36897 503 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 RPS19P39019 145 aaKnown RBP9.96□□□□□ -0.82
SLIRP-211ENST00000557623 KRTAP10-3P60369 221 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 SRSF4Q08170 494 aaKnown RBP9.96□□□□□ -0.82
SLIRP-211ENST00000557623 HNF4GQ14541 408 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 ABCA11PQ4W5N1 156 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 Q6ZS49 121 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 ODF3L1Q8IXM7 274 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 OR5H6Q8NGV6 325 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 EAF1Q96JC9 268 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-211ENST00000557623 S1PR3Q99500 378 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 DCSTAMPQ9H295 470 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 IFI27L2Q9H2X8 130 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 DIABLOQ9NR28 239 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 OR1A1Q9P1Q5 309 aa9.96□□□□□ -0.82
SLIRP-211ENST00000557623 SAA2-SAA4A0A096LPE2 208 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 M0QZ24 198 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 SAA2P0DJI9 122 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-211ENST00000557623 GNG2P59768 71 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 LSAMPQ13449 338 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF260Q3ZCT1 412 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 FBLN7Q53RD9 439 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 PRR31Q5SQ13 230 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 Q6ZS46 218 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 ANKRD13BQ86YJ7 626 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 OR8H1Q8NGG4 311 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 OR10J5Q8NHC4 309 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 CABLES2Q9BTV7 478 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 TOLLIPQ9H0E2 274 aa9.95□□□□□ -0.82
SLIRP-211ENST00000557623 C11orf54Q9H0W9 315 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF230Q9UIE0 474 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-211ENST00000557623 IGKV1-6A0A0C4DH72 117 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 TMEM235A6NFC5 223 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
SLIRP-211ENST00000557623 BET1O15155 118 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 AMY1AP04745 511 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 AMY2AP04746 511 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 GSTT2P0CG29 244 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 GSTT2BP0CG30 244 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 OR3A3P47888 321 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 VBP1P61758 197 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 NCS1P62166 190 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 C9orf152Q5JTZ5 239 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 UBE2NLQ5JXB2 153 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 GPR141Q7Z602 305 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 Q8N6K4 173 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 S100A16Q96FQ6 103 aaKnown RBP9.94□□□□□ -0.82
SLIRP-211ENST00000557623 NABP2Q9BQ15 211 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 GINS4Q9BRT9 223 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 MRPL20Q9BYC9 149 aaKnown RBP9.94□□□□□ -0.82
SLIRP-211ENST00000557623 WNT10AQ9GZT5 417 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 ABCG5Q9H222 651 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 RDH8Q9NYR8 311 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF221Q9UK13 617 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 TENM1Q9UKZ4 2725 aa9.94□□□□□ -0.82
SLIRP-211ENST00000557623 TRAV18A0A075B6X5 111 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 TRBV6-7A0A0A0MS04 114 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF736B4DX44 427 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-211ENST00000557623 FAM229AH3BQW9 127 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 FBXO24O75426 580 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 GABARAPO95166 117 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 CTXN2P0C2S0 81 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ALDH3B2P48448 385 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 IGSF11Q5DX21 431 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 CENPVQ7Z7K6 275 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-211ENST00000557623 NUDCD2Q8WVJ2 157 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ACOT12Q8WYK0 555 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 MAFIPQ8WZ33 124 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ABHD14BQ96IU4 210 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 AGMATQ9BSE5 352 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 PARP12Q9H0J9 701 aaKnown RBP9.93□□□□□ -0.82
SLIRP-211ENST00000557623 LIN7CQ9NUP9 197 aaKnown RBP9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ELF5Q9UKW6 265 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-211ENST00000557623 ANK2Q01484 3957 aa9.93□□□□□ -0.82
SLIRP-211ENST00000557623 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 XRCC3O43542 346 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 MC5RP33032 325 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 GPR12P47775 334 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 RORCP51449 518 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 RPL39P5Q59GN2 51 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 GPR107Q5VW38 600 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 SAMD12Q8N8I0 201 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 Q8N9W7 124 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms