RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 GHITMQ9H3K2 345 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 PLEKHJ1Q9NW61 149 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 ZNF256Q9Y2P7 627 aaPredicted RBP12.35□□□□□ -0.43
TUBB3-213ENST00000557262 RYR3Q15413 4870 aa12.35□□□□□ -0.43
TUBB3-213ENST00000557262 PTGES3LE9PB15 166 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 CASQ2O14958 399 aaPredicted RBP12.34□□□□□ -0.43
TUBB3-213ENST00000557262 ST8SIA5O15466 376 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 NAPSAO96009 420 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 MC5RP33032 325 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 SPHARQ15513 63 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 HSD17B12Q53GQ0 312 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 CEACAM19Q7Z692 300 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 SVOPQ8N4V2 548 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 NICN1Q9BSH3 213 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 RIMS4Q9H426 269 aaPredicted RBP12.34□□□□□ -0.43
TUBB3-213ENST00000557262 CHMP1AQ9HD42 196 aaPredicted RBP12.34□□□□□ -0.43
TUBB3-213ENST00000557262 SLC23A1Q9UHI7 598 aa12.34□□□□□ -0.43
TUBB3-213ENST00000557262 TMEM14DPA8MWL7 114 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 ITGB1BP1O14713 200 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 RRHO14718 337 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 SLC22A1O15245 554 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 CT45A6P0DMU7 189 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 CT45A5P0DMU8 189 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 CT45A7P0DMV0 189 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 GNB1P62873 340 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 CX3CL1P78423 397 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 QRFPP83859 136 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 UNC119Q13432 240 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 FAM131AQ6UXB0 335 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 SETD6Q8TBK2 473 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 DCUN1D4Q92564 292 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 NUBP2Q9Y5Y2 271 aa12.33□□□□□ -0.44
TUBB3-213ENST00000557262 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 OR5H14A6NHG9 310 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 OVOL1O14753 267 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 BPNT1O95861 308 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 GSTP1P09211 210 aaKnown RBP12.32□□□□□ -0.44
TUBB3-213ENST00000557262 UCHL1P09936 223 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 CRIP2P52943 208 aaPredicted RBP12.32□□□□□ -0.44
TUBB3-213ENST00000557262 TMEM267Q0VDI3 215 aaPredicted RBP12.32□□□□□ -0.44
TUBB3-213ENST00000557262 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 C19orf54Q5BKX5 351 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 MOB1BQ7L9L4 216 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 ZNF429Q86V71 674 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 TCTEX1D1Q8N7M0 179 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 OR6M1Q8NGM8 313 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 RNF5Q99942 180 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 AGMATQ9BSE5 352 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
TUBB3-213ENST00000557262 VCXQ9H320 206 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 KCNK15Q9H427 330 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 SCN3BQ9NY72 215 aa12.32□□□□□ -0.44
TUBB3-213ENST00000557262 LSM2Q9Y333 95 aaKnown RBP12.32□□□□□ -0.44
TUBB3-213ENST00000557262 A0A0A6YYD4 124 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 A0A1W2PN81 502 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 FCN1O00602 326 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 RBBP9O75884 186 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 LY86O95711 162 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 ZBTB25P24278 435 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 CHRNA7P36544 502 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 CEACAM6P40199 344 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 PLGLAQ15195 96 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 MED22Q15528 200 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 ECSCRQ19T08 205 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 GLDNQ6ZMI3 551 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-213ENST00000557262 FAM89BQ8N5H3 189 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 OR5AN1Q8NGI8 311 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 ABHD14BQ96IU4 210 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 ASCL2Q99929 193 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 C11orf54Q9H0W9 315 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-213ENST00000557262 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 RNF150Q9ULK6 438 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 MGAT4AQ9UM21 535 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 FOXA2Q9Y261 457 aaPredicted RBP12.31□□□□□ -0.44
TUBB3-213ENST00000557262 WASHC3Q9Y3C0 194 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 FBXO7Q9Y3I1 522 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 SMAD5-AS1Q9Y6J3 95 aa12.31□□□□□ -0.44
TUBB3-213ENST00000557262 LINC01619G3V211 115 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 H0YJW9 148 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 H7C2Y5 167 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 SOCS1O15524 211 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 SOX15O60248 233 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 EGR2P11161 476 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-213ENST00000557262 ARSBP15848 533 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 NDPQ00604 133 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 CD200R1LQ6Q8B3 271 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 EDARADDQ8WWZ3 215 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 DLX4Q92988 240 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-213ENST00000557262 TOLLIPQ9H0E2 274 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 PARP12Q9H0J9 701 aaKnown RBP12.3□□□□□ -0.44
TUBB3-213ENST00000557262 ALX4Q9H161 411 aaPredicted RBP12.3□□□□□ -0.44
TUBB3-213ENST00000557262 AK3Q9UIJ7 227 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 HSF4Q9ULV5 492 aa12.3□□□□□ -0.44
TUBB3-213ENST00000557262 HSPA12AO43301 675 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 PROP1O75360 226 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 TMEM50BP56557 158 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 IRF3Q14653 427 aa12.29□□□□□ -0.44
TUBB3-213ENST00000557262 AKIRIN2Q53H80 203 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms