RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MED29Q9NX70 200 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF391Q9UJN7 358 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 FBXO7Q9Y3I1 522 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 V9GYS6 101 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 KIF26BQ2KJY2 2108 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 DMXL1Q9Y485 3027 aa3.95□□□□□ -1.78
ATXN3-246ENST00000557030 TDRD6O60522 2096 aaKnown RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 THADAQ6YHU6 1953 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 PCDH15Q96QU1 1955 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 CACNA1HO95180 2353 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 IGHV1OR21-1A0A087WYE8 117 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 A0A087WZY1 265 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 IGKV1-9A0A0C4DH69 117 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 A0A1B0GX78 115 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 A0A1W2PS18 150 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM8BA6NDV4 472 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 C17orf51A8MQB3 221 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF732B4DXR9 585 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 H3BQ15 152 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 RPL36A-HNRNPH2H7BZ11 118 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 M0R296 226 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ZNHIT1O43257 154 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 TRAF3IP2O43734 574 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 NDUFS6O75380 124 aaKnown RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 PTBP3O95758 552 aaKnown RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ARG1P05089 322 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 HEXBP07686 556 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SRP19P09132 144 aaKnown RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR5AC1P0C628 307 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR13C7P0DN81 318 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 CEACAM1P13688 526 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 FOLR1P15328 257 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 HIST1H1BP16401 226 aaKnown RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF17P17021 662 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SERPINA2P20848 420 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 MSR1P21757 451 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 AKR1C3P42330 323 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 CSNK1A1P48729 337 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 RBP2P50120 134 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 NDUFA6P56556 154 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 FBXW4P57775 412 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR2B8PP59922 312 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 RND3P61587 244 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 PKIAP61925 76 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 EWSR1Q01844 656 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 FOXF1Q12946 379 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR8G1Q15617 311 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 HIST3H3Q16695 136 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 Q3ZCU0 254 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 KHDC3LQ587J8 217 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF506Q5JVG8 444 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 C10orf128Q5T292 105 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 AKR1C8PQ5T2L2 129 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 PET117Q6UWS5 81 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM182Q6ZP80 229 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ZNF429Q86V71 674 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SLC25A45Q8N413 288 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM156Q8N614 296 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 APCDD1LQ8NCL9 501 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SLC24A4Q8NFF2 622 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR5L2Q8NGL0 311 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR4D5Q8NGN0 318 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 OR2G3Q8NGZ4 309 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 HPSE2Q8WWQ2 592 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 RTN4IP1Q8WWV3 396 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 MR1Q95460 341 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SPTSSAQ969W0 71 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SGK3Q96BR1 496 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 S100PBPQ96BU1 408 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 MOB3AQ96BX8 217 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 TVP23CQ96ET8 276 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 DNAJA3Q96EY1 480 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 SPACA5Q96QH8 159 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 VN1R1Q9GZP7 353 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 PLEKHF2Q9H8W4 249 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 ELL3Q9HB65 397 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM242Q9NWH2 141 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 KLRF1Q9NZS2 232 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 B3GAT1Q9P2W7 334 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 AK3Q9UIJ7 227 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 RNF150Q9ULK6 438 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 RCL1Q9Y2P8 373 aaKnown RBP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 PUS1Q9Y606 427 aaKnown RBP eCLIP3.94□□□□□ -1.78
ATXN3-246ENST00000557030 KMT2EQ8IZD2 1858 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 EPG5Q9HCE0 2579 aa3.94□□□□□ -1.78
ATXN3-246ENST00000557030 NCOR2Q9Y618 2525 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 ANKRD11Q6UB99 2663 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TRAV1-1A0A0B4J248 108 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 A0A1W2PP11 408 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 SMCO3A2RU48 225 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 OR5H15A6NDH6 313 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 OR5H1A6NKK0 313 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TRDCB7Z8K6 153 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 TMEM178BH3BS89 294 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 CLDN34H7C241 214 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 HSD17B6O14756 317 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 DUX1O43812 170 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 DFFBO76075 338 aa3.93□□□□□ -1.78
ATXN3-246ENST00000557030 VAMP5O95183 116 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms