RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF701M0R085 212 aaPredicted RBP14.03□□□□□ -0.16
SHMT2-225ENST00000556798 CRYBA1P05813 215 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 PRSS3P35030 304 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 RELBQ01201 579 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 RNASE12Q5GAN4 147 aaKnown RBP14.03□□□□□ -0.16
SHMT2-225ENST00000556798 CNIH2Q6PI25 160 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 HOGA1Q86XE5 327 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 MCFD2Q8NI22 146 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 EDARADDQ8WWZ3 215 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 SNAPC3Q92966 411 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 C1RLQ9NZP8 487 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 RNF150Q9ULK6 438 aa14.03□□□□□ -0.16
SHMT2-225ENST00000556798 ITGB1BP1O14713 200 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 DIRAS3O95661 229 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 SNRNP70P08621 437 aaKnown RBP14.02□□□□□ -0.17
SHMT2-225ENST00000556798 HKR1P10072 659 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 CBX5P45973 191 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 ARPC4P59998 168 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 RPL39P5Q59GN2 51 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 FOXB2Q5VYV0 432 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 ZNF833PQ6ZTB9 187 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 H1FOOQ8IZA3 346 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-225ENST00000556798 AGMATQ9BSE5 352 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 MRPL20Q9BYC9 149 aaKnown RBP14.02□□□□□ -0.17
SHMT2-225ENST00000556798 ADAM30Q9UKF2 790 aa14.02□□□□□ -0.17
SHMT2-225ENST00000556798 TMEM89A2RUT3 159 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 ZNF736B4DX44 427 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-225ENST00000556798 J3QRK9 145 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 LANCL1O43813 399 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 IGKV1D-33P01593 117 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 IGKV1-33P01594 117 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 LPLP06858 475 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 NFYAP23511 347 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-225ENST00000556798 RAG2P55895 527 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 HES1Q14469 280 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 LIAT1Q6ZQX7 453 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 ZNF251Q9BRH9 671 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 NXF2Q9GZY0 626 aaKnown RBP14.01□□□□□ -0.17
SHMT2-225ENST00000556798 TOLLIPQ9H0E2 274 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 PIPOXQ9P0Z9 390 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 PITPNC1Q9UKF7 332 aa14.01□□□□□ -0.17
SHMT2-225ENST00000556798 FAM90A9PA6NNJ1 464 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 RAB29O14966 203 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 TXNL1O43396 289 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 CTXN2P0C2S0 81 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 OR8U9P0C7N5 309 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 GPR12P47775 334 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 RPL15P61313 204 aaKnown RBP14□□□□□ -0.17
SHMT2-225ENST00000556798 HABP2Q14520 560 aaPredicted RBP14□□□□□ -0.17
SHMT2-225ENST00000556798 HNF4GQ14541 408 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 Q6ZSV7 163 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 OR8U1Q8NH10 309 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 GPX8Q8TED1 209 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 DIRAS2Q96HU8 199 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 SLC25A33Q9BSK2 321 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 OR2D2Q9H210 308 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 RAB18Q9NP72 206 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 ANAPC10Q9UM13 185 aa14□□□□□ -0.17
SHMT2-225ENST00000556798 STAB1Q9NY15 2570 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 FAM106CPP0CH98 169 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 MDKP21741 143 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-225ENST00000556798 LSAMPQ13449 338 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 ABHD1Q96SE0 405 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 S1PR3Q99500 378 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 NABP2Q9BQ15 211 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 SCPEP1Q9HB40 452 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 ZNF221Q9UK13 617 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 RBM7Q9Y580 266 aaKnown RBP13.99□□□□□ -0.17
SHMT2-225ENST00000556798 TENM1Q9UKZ4 2725 aa13.99□□□□□ -0.17
SHMT2-225ENST00000556798 TMEM11P17152 192 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 AWAT1Q58HT5 328 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 FAM71F2Q6NXP2 309 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 GLDNQ6ZMI3 551 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-225ENST00000556798 THNSL2Q86YJ6 484 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 DRAXINQ8NBI3 349 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-225ENST00000556798 DGCR14Q96DF8 476 aaKnown RBP13.98□□□□□ -0.17
SHMT2-225ENST00000556798 C5orf30Q96GV9 206 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 RBM14Q96PK6 669 aaKnown RBP13.98□□□□□ -0.17
SHMT2-225ENST00000556798 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 NDUFA13Q9P0J0 144 aa13.98□□□□□ -0.17
SHMT2-225ENST00000556798 PROP1O75360 226 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 OR2F2O95006 317 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 NDUFA7O95182 113 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 PMP2P02689 132 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 HLA-DMAP28067 261 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 CDK10Q15131 360 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 OR5AP2Q8NGF4 316 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 OR4F5Q8NH21 305 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 OR52I2Q8NH67 350 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 EAF1Q96JC9 268 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-225ENST00000556798 NPFFR1Q9GZQ6 430 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 OR2W1Q9Y3N9 320 aa13.97□□□□□ -0.17
SHMT2-225ENST00000556798 IGKV1D-13A0A0B4J2D9 117 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 SH2D7A6NKC9 451 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-225ENST00000556798 M0R1X1 148 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 SULT1C2O00338 296 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 CT45A6P0DMU7 189 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 CT45A5P0DMU8 189 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 CT45A7P0DMV0 189 aa13.96□□□□□ -0.17
SHMT2-225ENST00000556798 OR5H8P0DN80 308 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms