RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 THNSL2Q86YJ6 484 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 Q8N402 240 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 C5orf56Q8N8D9 126 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 OR10R2Q8NGX6 335 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 OR10X1Q8NGY0 326 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 OR1L1Q8NH94 360 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 C15orf40Q8WUR7 153 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 CAPSLQ8WWF8 208 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 RAB3CQ96E17 227 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 AKR1E2Q96JD6 320 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 NEDD4LQ96PU5 975 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 CITED2Q99967 270 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-224ENST00000556737 SULT4A1Q9BR01 284 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 TM2D1Q9BX74 207 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 LPAR5Q9H1C0 372 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 RABL2AQ9UBK7 228 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-224ENST00000556737 RABL2BQ9UNT1 228 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 MOB4Q9Y3A3 225 aa8.21□□□□□ -1.1
SHMT2-224ENST00000556737 A0A0A6YYH2 397 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 IGHV1-3A0A0C4DH29 117 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 LINC00854A0A1B0GVQ3 168 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 A6NJ64 397 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 SOCS1O15524 211 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 OPN1MWP04001 364 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 LPLP06858 475 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 OPN1MW2P0DN77 364 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 OPN1MW3P0DN78 364 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 GNB3P16520 340 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 PTBP1P26599 531 aaKnown RBP eCLIP8.2□□□□□ -1.1
SHMT2-224ENST00000556737 REG1BP48304 166 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF134P52741 427 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 GNG2P59768 71 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 MRPS15P82914 257 aaKnown RBP8.2□□□□□ -1.1
SHMT2-224ENST00000556737 ARFRP1Q13795 201 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 EBI3Q14213 229 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 GNMTQ14749 295 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 CDNFQ49AH0 187 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-224ENST00000556737 C6orf183Q5T699 404 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF57Q68EA5 555 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-224ENST00000556737 C10orf99Q6UWK7 81 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 Q8N6K4 173 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 GDPD1Q8N9F7 314 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 OR10V1Q8NGI7 309 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 SRRQ9GZT4 340 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 PLEKHJ1Q9NW61 149 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 TRAPPC2LQ9UL33 140 aa8.2□□□□□ -1.1
SHMT2-224ENST00000556737 MEIS3P1A6NDR6 274 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 TMEM235A6NFC5 223 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 FOXI3A8MTJ6 420 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-224ENST00000556737 M0QZK8 103 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 SPINT2O43291 252 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 IGKV1D-33P01593 117 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 IGKV1-33P01594 117 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 FAM106CPP0CH98 169 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 PTHLHP12272 177 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 TMEM11P17152 192 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 PRSS3P35030 304 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 CD83Q01151 205 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 HMGN3Q15651 99 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF79Q15937 498 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 NSUN5P1Q3KNT7 163 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 PDLIM3Q53GG5 364 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-224ENST00000556737 CT45A1Q5HYN5 189 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 TRAT1Q6PIZ9 186 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 C6orf201Q7Z4U5 140 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF554Q86TJ5 538 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 C1QL4Q86Z23 238 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 PRR18Q8N4B5 295 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 CT45A3Q8NHU0 189 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 RTN4IP1Q8WWV3 396 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-224ENST00000556737 FCAMRQ8WWV6 532 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 RBMXL1Q96E39 390 aaKnown RBP8.19□□□□□ -1.1
SHMT2-224ENST00000556737 ARHGAP5-AS1Q96IT6 56 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 ABHD1Q96SE0 405 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 CCDC32Q9BV29 185 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 AUNIPQ9H7T9 357 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 TAF9BQ9HBM6 251 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 IFT46Q9NQC8 304 aa8.19□□□□□ -1.1
SHMT2-224ENST00000556737 PLXNB1O43157 2135 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 IGHV3-72A0A0B4J1Y9 119 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 G3V4G9 280 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 H3BUI4 141 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 RAB27BO00194 218 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 FGF16O43320 207 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 PEX14O75381 377 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 UPK1BO75841 260 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 NAPSAO96009 420 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 GAPDHP04406 335 aaKnown RBP8.18□□□□□ -1.1
SHMT2-224ENST00000556737 FCER2P06734 321 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 CD3GP09693 182 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 HIST1H1DP16402 221 aaKnown RBP8.18□□□□□ -1.1
SHMT2-224ENST00000556737 MRPS10P82664 201 aaKnown RBP8.18□□□□□ -1.1
SHMT2-224ENST00000556737 DGCR2P98153 550 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 HES1Q14469 280 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 ARL6IP1Q15041 203 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 BEAN1Q3B7T3 259 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 ZNF880Q6PDB4 577 aa8.18□□□□□ -1.1
SHMT2-224ENST00000556737 OR5AU1Q8NGC0 362 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms