RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TMEM267Q0VDI3 215 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 RSPO1Q2MKA7 263 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 C10orf128Q5T292 105 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM244Q5VVB8 128 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 DUX4L9Q6RFH8 374 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 FOXL2NBQ6ZUU3 175 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TMUB2Q71RG4 321 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 GGNQ86UU5 652 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 H1FOOQ8IZA3 346 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 SULT4A1Q9BR01 284 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 MIEN1Q9BRT3 115 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 THYN1Q9P016 225 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CKLFQ9UBR5 152 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CARHSP1Q9Y2V2 147 aaKnown RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ARHGAP21Q5T5U3 1957 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 EP300Q09472 2414 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TRAV18A0A075B6X5 111 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 A0A1B0GU03 582 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 KANTRA0A1W2PQU2 76 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 PINLYPA6NC86 204 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TNFSF11O14788 317 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 RS1O15537 224 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TRAPPC6AO75865 159 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 NDUFB6O95139 128 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 IGLV3-1P01715 115 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CTSDP07339 412 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 OR13C7P0DN81 318 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CD96P40200 585 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 SELENOPP49908 381 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 FABP6P51161 128 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TCTAP57738 103 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF121P58317 390 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF415Q09FC8 603 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ENDOGQ14249 297 aaKnown RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 C1orf194Q5T5A4 169 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ADGRE4PQ86SQ3 457 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 INO80EQ8NBZ0 244 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 OR13C6PQ8NH95 151 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 OR51E1Q8TCB6 317 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 SSC4DQ8WTU2 575 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CASTOR1Q8WTX7 329 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM54Q969K7 222 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 C1orf147Q96MC9 270 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 JSRP1Q96MG2 331 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 PSMG3Q9BT73 122 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ACTR3CQ9C0K3 210 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 JKAMPQ9P055 326 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 JPT1Q9UK76 154 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 OR51B2Q9Y5P1 312 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF816-ZNF321PA0A0X1KG74 233 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 NPIPB5A8MRT5 1133 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 RAB27BO00194 218 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 MMP9P14780 707 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CCL1P22362 96 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 GLRXP35754 106 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 GFI1BQ5VTD9 330 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 UNQ5815/PRO19632Q6UWF5 114 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 GLDNQ6ZMI3 551 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 RBPMS2Q6ZRY4 209 aaKnown RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 OR5AS1Q8N127 324 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 BEST3Q8N1M1 668 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 OR4A4PQ8NGN8 299 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 MRAPQ8TCY5 172 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 C15orf40Q8WUR7 153 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ASB13Q8WXK3 278 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF471Q9BX82 626 aaPredicted RBP4.37□□□□□ -1.71
TMEM260-210ENST00000556422 NOX3Q9HBY0 568 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 DLL4Q9NR61 685 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 CA10Q9NS85 328 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 TAS2R8Q9NYW2 309 aa4.37□□□□□ -1.71
TMEM260-210ENST00000556422 NKX2-6A6NCS4 301 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PYCARD-AS1I3L0S3 204 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 FCN3O75636 299 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 CD3DP04234 171 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 SFTPBP07988 381 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 SOD3P08294 240 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR5AC1P0C628 307 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR5H8P0DN80 308 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 NPY1RP25929 384 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 CAMPP49913 170 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 PAX9P55771 341 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 HIST1H3AP68431 136 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 HIST1H1AQ02539 215 aaPredicted RBP4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR2F1Q13607 317 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 UBE2V2Q15819 145 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 DHRS11Q6UWP2 260 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 FA2HQ7L5A8 372 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 OR10G9Q8NGN4 311 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM18Q96B42 140 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 LYZL4Q96KX0 146 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 CTDSP1Q9GZU7 261 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ZDHHC11Q9H8X9 412 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 ATMQ13315 3056 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 MGAQ8IWI9 3026 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 IGKV1-9A0A0C4DH69 117 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 A0A1B0GUS0 222 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 MEGF11A6BM72 1044 aa4.36□□□□□ -1.71
TMEM260-210ENST00000556422 VSIG10L2P0DP72 767 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms