RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 MMP26Q9NRE1 261 aa7.55□□□□□ -1.2
ACTN1-218ENST00000556343 CCL28Q9NRJ3 127 aa7.55□□□□□ -1.2
ACTN1-218ENST00000556343 HIF1ANQ9NWT6 349 aa7.55□□□□□ -1.2
ACTN1-218ENST00000556343 RNF150Q9ULK6 438 aa7.55□□□□□ -1.2
ACTN1-218ENST00000556343 VSIG4Q9Y279 399 aa7.55□□□□□ -1.2
ACTN1-218ENST00000556343 KIAA2026Q5HYC2 2103 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 A0A096LNT2 108 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 LEUTXA8MZ59 168 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 MMP23AO75900 390 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 ARG1P05089 322 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 COX7A1P24310 79 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 GNRHRP30968 328 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 KIR2DS2P43631 304 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 MECP2P51608 486 aaKnown RBP7.54□□□□□ -1.2
ACTN1-218ENST00000556343 ARHGDIBP52566 201 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 BPIFB3P59826 476 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 SRPXP78539 464 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
ACTN1-218ENST00000556343 DHODHQ02127 395 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 BAMBIQ13145 260 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 CBX3Q13185 183 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 CT45A1Q5HYN5 189 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 FAM71F2Q6NXP2 309 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 KCTD9Q7L273 389 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 C11orf42Q8N5U0 333 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 TCTEX1D1Q8N7M0 179 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 Q8N7P7 452 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 BVESQ8NE79 360 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 WFDC11Q8NEX6 87 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 CT45A3Q8NHU0 189 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 CD300LFQ8TDQ1 290 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 RTN4IP1Q8WWV3 396 aaPredicted RBP7.54□□□□□ -1.2
ACTN1-218ENST00000556343 FXYD6Q9H0Q3 95 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 C5orf66Q9H5L9 145 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 SIRT7Q9NRC8 400 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 FLVCR2Q9UPI3 526 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 PRELID3BQ9Y3B1 194 aa7.54□□□□□ -1.2
ACTN1-218ENST00000556343 DOCK11Q5JSL3 2073 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 IGKV1D-13A0A0B4J2D9 117 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 SNRPGP15A8MWD9 76 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 MPPED1O15442 326 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 TXNL1O43396 289 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 CREBL2O60519 120 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 PGLYRP1O75594 196 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 ATG12O94817 140 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 IGHV3-7P01780 117 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 GAPDHP04406 335 aaKnown RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 OR4E1P0C645 316 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 IGHV4-31P0DP07 118 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 IGKV1-13P0DP09 117 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 SPNP16150 400 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 ANXA7P20073 488 aaKnown RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 HTR1DP28221 377 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 THBS3P49746 956 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 UBE2E1P51965 193 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 ZNF134P52741 427 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 RAB25P57735 213 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 MINOS1Q5TGZ0 78 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 GPR157Q5UAW9 335 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 GLDNQ6ZMI3 551 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 ZNF818PQ6ZRF7 136 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 ZNF439Q8NDP4 499 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 COQ8AQ8NI60 647 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 LEAP2Q969E1 77 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 UPRTQ96BW1 309 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 MSI2Q96DH6 328 aaKnown RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 PHB2Q99623 299 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 RTBDNQ9BSG5 229 aaPredicted RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 NAA60Q9H7X0 242 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 SLC2A9Q9NRM0 540 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 SDHAF2Q9NX18 166 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 DPM3Q9P2X0 92 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 TBL2Q9Y4P3 447 aaKnown RBP7.53□□□□□ -1.2
ACTN1-218ENST00000556343 MINOS1-NBL1R4GNA1 71 aa7.53□□□□□ -1.2
ACTN1-218ENST00000556343 A0A1W2PPE3 182 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 CRYM-AS1A6NIL9 109 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 OOSP1A8MZH6 123 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 BUB1B-PAK6H3BSN5 160 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 M0R1X1 148 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 SMAD7O15105 426 aaKnown RBP7.52□□□□□ -1.21
ACTN1-218ENST00000556343 SFT2D2O95562 160 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 IFNA2P01563 188 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 SERPINE2P07093 398 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 RRASP10301 218 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 MMP9P14780 707 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 PI3P19957 117 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 VAMP1P23763 118 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 TATDN3Q17R31 274 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 HLA-DRB5Q30154 266 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 MIDNQ504T8 468 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 ZNF626Q68DY1 528 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 CCDC144NLQ6NUI1 221 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 Q6ZNX1 250 aa7.52□□□□□ -1.21
ACTN1-218ENST00000556343 LYG2Q86SG7 212 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms