RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 CXorf65A6NEN9 183 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 VSTM5A8MXK1 200 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 SCAF4O95104 1147 aaKnown RBP12.63□□□□□ -0.39
NEK9-209ENST00000556170 SCGB1D1O95968 90 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 GNG10P50151 68 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 FOXL2NBQ6ZUU3 175 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 DCTN5Q9BTE1 182 aa12.63□□□□□ -0.39
NEK9-209ENST00000556170 PAX6P26367 422 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 MZT1Q08AG7 82 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 MOGAT3Q86VF5 341 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 BCL2L2Q92843 193 aaPredicted RBP12.62□□□□□ -0.39
NEK9-209ENST00000556170 WFDC1Q9HC57 220 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 COA4Q9NYJ1 87 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 IL18BPO95998 194 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 MPV17P39210 176 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 GLIPR1P48060 266 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 MOB1BQ7L9L4 216 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 USP34Q70CQ2 3546 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 LRP4O75096 1905 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 TRAV24A0A0B4J272 114 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 HBZP02008 142 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 COX5BP10606 129 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 FGF7P21781 194 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 SSTR5P35346 364 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 ZNF528Q3MIS6 628 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 TMEM42Q69YG0 159 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 OR4F5Q8NH21 305 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 PLPPR1Q8TBJ4 325 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 OR4F4Q96R69 305 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 CXXC4Q9H2H0 198 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 DYNLRB1Q9NP97 96 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 AUP1Q9Y679 476 aa12.62□□□□□ -0.39
NEK9-209ENST00000556170 TRBV6-7A0A0A0MS04 114 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 UCP3P55916 312 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 RAB4BP61018 213 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 COL10A1Q03692 680 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 INO80CQ6PI98 192 aaPredicted RBP12.61□□□□□ -0.39
NEK9-209ENST00000556170 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
NEK9-209ENST00000556170 FRZBQ92765 325 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 ATP5SQ99766 215 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 ZGRF1Q86YA3 2104 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 IGKV3D-15A0A087WSY6 115 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 HNF1AP20823 631 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 IL24Q13007 206 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 C20orf204Q6ZNR8 217 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 LEAP2Q969E1 77 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 SMIM7Q9BQ49 75 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 IL36GQ9NZH8 169 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 TUBD1Q9UJT1 453 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 CBY3A6NI87 242 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 SULT1A1P50225 295 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 MRPL30Q8TCC3 161 aaKnown RBP12.61□□□□□ -0.39
NEK9-209ENST00000556170 LOXL4Q96JB6 756 aa12.61□□□□□ -0.39
NEK9-209ENST00000556170 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.61□□□□□ -0.39
NEK9-209ENST00000556170 INTS1Q8N201 2190 aaKnown RBP12.61□□□□□ -0.39
NEK9-209ENST00000556170 ZNF729A6NN14 1252 aaPredicted RBP12.6□□□□□ -0.39
NEK9-209ENST00000556170 H0Y980 276 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 CYB5BO43169 146 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FGF16O43320 207 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 TGOLN2O43493 480 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 DANCRP0C864 163 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 SNCAP37840 140 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 MDH2P40926 338 aaKnown RBP12.6□□□□□ -0.39
NEK9-209ENST00000556170 TGIF2LXQ8IUE1 241 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 CYB561D1Q8N8Q1 229 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 DTD1Q8TEA8 209 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 HIPK2Q9H2X6 1198 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 MRPS18CQ9Y3D5 142 aaKnown RBP12.6□□□□□ -0.39
NEK9-209ENST00000556170 SMPD2O60906 423 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM201AQ5SY85 155 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 LYG1Q8N1E2 194 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 C15orf54Q8N8G6 183 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 S1PR3Q99500 378 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 MAP1LC3B2A6NCE7 125 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A10PA6NDY2 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A18PA6NE21 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A16PA6NEW6 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A20PA6NIJ5 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A8PA6NJQ4 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A7PA6NKC0 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A22PA8MWA6 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A12PA8MX19 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A5PA8MXJ8 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A23PA8MXZ1 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A15PP0C7V4 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A13PP0C7W8 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A14PP0C7W9 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 FAM90A24PP0C7X0 464 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 PSMB3P49720 205 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 BHLHA15Q7RTS1 189 aaPredicted RBP12.6□□□□□ -0.39
NEK9-209ENST00000556170 DRAM1Q8N682 238 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 MAP1LC3BQ9GZQ8 125 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 ZNF665Q9H7R5 613 aa12.6□□□□□ -0.39
NEK9-209ENST00000556170 LYRM2Q9NU23 88 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms