RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 NAPSAO96009 420 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 CHRNA7P36544 502 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 FAM27D1Q5T7N8 215 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 GLT8D1Q68CQ7 371 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 ZNF660Q6AZW8 331 aaPredicted RBP14.58□□□□□ -0.08
CDKN3-209ENST00000556102 MS4A15Q8N5U1 240 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 TCTEX1D1Q8N7M0 179 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 FBLIM1Q8WUP2 373 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 PHYHIPQ92561 330 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 TM2D1Q9BX74 207 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 FBXL15Q9H469 300 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 SLC23A1Q9UHI7 598 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 FOXA2Q9Y261 457 aaPredicted RBP14.58□□□□□ -0.08
CDKN3-209ENST00000556102 FBXO7Q9Y3I1 522 aa14.58□□□□□ -0.08
CDKN3-209ENST00000556102 OR5H14A6NHG9 310 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 C3orf84H3BNL1 204 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 SOX15O60248 233 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 HTR2CP28335 458 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 GABPB1Q06547 395 aaPredicted RBP14.57□□□□□ -0.08
CDKN3-209ENST00000556102 RBM48Q5RL73 367 aaKnown RBP14.57□□□□□ -0.08
CDKN3-209ENST00000556102 MOB1BQ7L9L4 216 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 LRRTM1Q86UE6 522 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 BPIFB6Q8NFQ5 453 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 KCNG3Q8TAE7 436 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 TOLLIPQ9H0E2 274 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 ALX4Q9H161 411 aaPredicted RBP14.57□□□□□ -0.08
CDKN3-209ENST00000556102 CHMP1AQ9HD42 196 aaPredicted RBP14.57□□□□□ -0.08
CDKN3-209ENST00000556102 FKBP14Q9NWM8 211 aa14.57□□□□□ -0.08
CDKN3-209ENST00000556102 LINC01619G3V211 115 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 ITGB1BP1O14713 200 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 SAP30O75446 220 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 CT45A6P0DMU7 189 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 CT45A5P0DMU8 189 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 CT45A7P0DMV0 189 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 CX3CL1P78423 397 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 UNC119Q13432 240 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 PLGLAQ15195 96 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 RPL39P5Q59GN2 51 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 DLX4Q92988 240 aaPredicted RBP14.56□□□□□ -0.08
CDKN3-209ENST00000556102 NICN1Q9BSH3 213 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 KCNK15Q9H427 330 aa14.56□□□□□ -0.08
CDKN3-209ENST00000556102 TMEM14DPA8MWL7 114 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 H0YJW9 148 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 RBBP9O75884 186 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 LGALS1P09382 135 aaKnown RBP14.55□□□□□ -0.08
CDKN3-209ENST00000556102 MC5RP33032 325 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 SLURP1P55000 103 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 TMEM267Q0VDI3 215 aaPredicted RBP14.55□□□□□ -0.08
CDKN3-209ENST00000556102 RCN1Q15293 331 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 PYHIN1Q6K0P9 492 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 CD200R1LQ6Q8B3 271 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 GLDNQ6ZMI3 551 aaPredicted RBP14.55□□□□□ -0.08
CDKN3-209ENST00000556102 SETD6Q8TBK2 473 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 ABHD5Q8WTS1 349 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 ABHD14BQ96IU4 210 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 TMED9Q9BVK6 235 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 MND1Q9BWT6 205 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 PARP12Q9H0J9 701 aaKnown RBP14.55□□□□□ -0.08
CDKN3-209ENST00000556102 GHITMQ9H3K2 345 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 RIMS4Q9H426 269 aaPredicted RBP14.55□□□□□ -0.08
CDKN3-209ENST00000556102 TPSG1Q9NRR2 321 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 PLEKHJ1Q9NW61 149 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 WASHC3Q9Y3C0 194 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 NUBP2Q9Y5Y2 271 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 A3GALT2U3KPV4 340 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 DNAH7Q8WXX0 4024 aa14.55□□□□□ -0.08
CDKN3-209ENST00000556102 TRBV6-6A0A0A6YYG2 114 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 SLC22A1O15245 554 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 GSTP1P09211 210 aaKnown RBP14.54□□□□□ -0.08
CDKN3-209ENST00000556102 EGR2P11161 476 aaPredicted RBP14.54□□□□□ -0.08
CDKN3-209ENST00000556102 QRFPP83859 136 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 HSD17B12Q53GQ0 312 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 RNLSQ5VYX0 342 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 OR5AN1Q8NGI8 311 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 CASTOR1Q8WTX7 329 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 RNF150Q9ULK6 438 aa14.54□□□□□ -0.08
CDKN3-209ENST00000556102 IGHV4OR15-8A0A075B7B6 117 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 A0A087WW49 117 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 A0A0A6YYD4 124 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 H7C2Y5 167 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 FCN1O00602 326 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 BPNT1O95861 308 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 CDK1P06493 297 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 CD37P11049 281 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 SPNP16150 400 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 SRMP19623 302 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 ACSM6Q6P461 480 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 PPP1R27Q86WC6 154 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 SBSPONQ8IVN8 264 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 OR6M1Q8NGM8 313 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 OR6Q1Q8NGQ2 317 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 EDARADDQ8WWZ3 215 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 RNF5Q99942 180 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 AGMATQ9BSE5 352 aa14.53□□□□□ -0.08
CDKN3-209ENST00000556102 UCHL1P09936 223 aa14.52□□□□□ -0.09
CDKN3-209ENST00000556102 GP9P14770 177 aa14.52□□□□□ -0.09
CDKN3-209ENST00000556102 HLA-DRB3P79483 266 aa14.52□□□□□ -0.09
CDKN3-209ENST00000556102 AKIRIN2Q53H80 203 aa14.52□□□□□ -0.09
CDKN3-209ENST00000556102 ACTBL2Q562R1 376 aa14.52□□□□□ -0.09
CDKN3-209ENST00000556102 OGFRL1Q5TC84 451 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms