RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 GYPAP02724 150 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 FGF2P09038 288 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 APOBEC3AP31941 199 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 LPAR6P43657 344 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 EWSR1Q01844 656 aaKnown RBP eCLIP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 NHLH2Q02577 135 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 EIF4EBP1Q13541 118 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 LTC4SQ16873 150 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 FAM53AQ6NSI3 398 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 UNQ6494/PRO21346Q6UXR6 183 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 ZNF788Q6ZQV5 615 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 ZNF808Q8N4W9 903 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 KDF1Q8NAX2 398 aaPredicted RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 GAFA1Q96PS6 74 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 HSD17B10Q99714 261 aaKnown RBP8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 TAS2R3Q9NYW6 316 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 PSG11Q9UQ72 335 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 CACNA1DQ01668 2161 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 IGF2RP11717 2491 aa8.39□□□□□ -1.07
EFCAB11-209ENST00000556005 FAM24AA6NFZ4 105 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 A8MXK9 166 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 E7EQL1 145 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ST8SIA5O15466 376 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 IGKV1-5P01602 117 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 FAM157CP0CG43 387 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 BAXQ07812 192 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CLEC9AQ6UXN8 241 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CCDC28AQ8IWP9 274 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 DMRTC2Q8IXT2 367 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 SPAG16Q8N0X2 631 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ZCCHC24Q8N2G6 241 aaKnown RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 TMEM252Q8N6L7 170 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 TCTEX1D2Q8WW35 142 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ZCCHC14Q8WYQ9 949 aaKnown RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 SAT2Q96F10 170 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CCL13Q99616 98 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 DYNLRB1Q9NP97 96 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CALYQ9NYX4 217 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CACNG5Q9UF02 275 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 LAMP3Q9UQV4 416 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 RNF115Q9Y4L5 304 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 MMP24Q9Y5R2 645 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 PCNX1Q96RV3 2341 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 PLCE1Q9P212 2302 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 KBTBD11-OT1A0A1B0GTJ5 212 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 NKX6-3A6NJ46 265 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ZNF705EA8MWA4 302 aaPredicted RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 B9A039 149 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 KRBOX1C9JBD0 128 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 SIGLEC5O15389 551 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 FBXO24O75426 580 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CGB3P0DN86 165 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CGB7P0DN87 165 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 GPR12P47775 334 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 LOXL3P58215 753 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 RPL23AP62750 156 aaKnown RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 RPL30P62888 115 aaKnown RBP8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ZNF266Q14584 549 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 Q6ZRM9 215 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 LINC01560Q8TB33 94 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CD300LFQ8TDQ1 290 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CA5BP1Q8WTZ4 195 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 MARC2Q969Z3 335 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 C5orf30Q96GV9 206 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ARV1Q9H2C2 271 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 PRORYQ9H606 182 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 COA4Q9NYJ1 87 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 LPAR3Q9UBY5 353 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 CLN8Q9UBY8 286 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 SPTBN4Q9H254 2564 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 ICE1Q9Y2F5 2266 aa8.38□□□□□ -1.07
EFCAB11-209ENST00000556005 PPIAL4EA0A075B759 164 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 KIAA1324LA8MWY0 1029 aaPredicted RBP8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 NUDT19A8MXV4 375 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 PPIAL4DF5H284 164 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 TEX46H3BTG2 121 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 LGALS8O00214 317 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 ITGB1BP1O14713 200 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 SHOXO15266 292 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 TMPRSS2O15393 492 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 RAMP3O60896 148 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 NXPH3O95157 252 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 PPIAL4FP0DN26 164 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 SELLP14151 372 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 ZP3P21754 424 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 SULT1A2P50226 295 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 RAB7AP51149 207 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 EFNB3Q15768 340 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 Q3ZCU0 254 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 TGIF2LYQ8IUE0 185 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 CCL17Q92583 94 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 CORO2AQ92828 525 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 BSCL2Q96G97 398 aaPredicted RBP8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 WFDC1Q9HC57 220 aa8.37□□□□□ -1.07
EFCAB11-209ENST00000556005 PPIAL4AQ9Y536 164 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms