RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 IGLV3-19P01714 112 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 CLLU1Q5K131 121 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 SPANXN1Q5VSR9 72 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 APCDD1LQ8NCL9 501 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM18Q96B42 140 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 IGLV1-36A0A0B4J1U3 117 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 CDRT15L2A8MXV6 281 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 LMX1BO60663 402 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 PLAUP00749 431 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 FDX2Q6P4F2 183 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 PRNTQ86SH4 94 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 COMMD1Q8N668 190 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 FAM216AQ8WUB2 273 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 SSBP3Q9BWW4 388 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-220ENST00000555612 ST6GALNAC2Q9UJ37 374 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 HIST1H3AP68431 136 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM78Q5T7P6 136 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 WNT9BO14905 357 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 IGKV3-11P04433 115 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 CECR9P0C854 216 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 CD59P13987 128 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 OR10J1P30954 320 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 GLIPR1P48060 266 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 PPOXP50336 477 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 IGLV3-21P80748 117 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-220ENST00000555612 RNF151Q2KHN1 245 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 FAM209AQ5JX71 171 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 PKIBQ9C010 78 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 MRPS18AQ9NVS2 196 aaKnown RBP7.06□□□□□ -1.28
SYNE2-220ENST00000555612 WDR90Q96KV7 1748 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 REG1AP05451 166 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 PRSS1P07477 247 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 VSIG10L2P0DP72 767 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 UNQ6494/PRO21346Q6UXR6 183 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF66Q6ZN08 573 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF561Q8N587 486 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 RHOVQ96L33 236 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 DLL3Q9NYJ7 618 aa7.06□□□□□ -1.28
SYNE2-220ENST00000555612 IGHV3-35A0A0C4DH35 117 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 MFNGO00587 321 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 EWSR1Q01844 656 aaKnown RBP eCLIP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 UNQ9370/PRO34162Q6UXP9 181 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 NEU4Q8WWR8 484 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 LPAR5Q9H1C0 372 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 TDRD15B5MCY1 1934 aaKnown RBP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 TAF1LQ8IZX4 1826 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 BMPR1BO00238 502 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 ST6GAL2Q96JF0 529 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 MARVELD1Q9BSK0 173 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 PAXXQ9BUH6 204 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 MANBALQ9NQG1 85 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 AHCTF1Q8WYP5 2266 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 GLRXP35754 106 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 LGALSLQ3ZCW2 172 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 FAM201AQ5SY85 155 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF645Q8N7E2 425 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 IGKV3D-11A0A0A0MRZ8 115 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 TEX50A0A1B0GTY4 177 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF735P0CB33 412 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 COX5BP10606 129 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 USF1P22415 310 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 ERVS71-1P61550 626 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 C9orf106Q8NAJ2 232 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 ZNRF1Q8ND25 227 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM204Q9BSN7 226 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 MFSD2BA6NFX1 497 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 LIMS1P48059 325 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 RNASE6Q93091 150 aaKnown RBP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 CTHRC1Q96CG8 243 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 MRPL37Q9BZE1 423 aaKnown RBP7.05□□□□□ -1.28
SYNE2-220ENST00000555612 RTN4RQ9BZR6 473 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 MMP26Q9NRE1 261 aa7.05□□□□□ -1.28
SYNE2-220ENST00000555612 PAGE4O60829 102 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 RAMP1O60894 148 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 SRSF10O75494 262 aaKnown RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 UMODP07911 640 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 RND2P52198 227 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 MFAP4P55083 255 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 IFITM3Q01628 133 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 FXYD3Q14802 87 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 WFDC6Q9BQY6 131 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM56-RWDD3S4R434 201 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 MBPP02686 304 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 RIGQ13278 110 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM255AQ5JRV8 349 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 STPG3Q8N7X2 389 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 MEGF10Q96KG7 1140 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 DCAF16Q9NXF7 216 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 V9GYH0 126 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF729A6NN14 1252 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 CDS2O95674 445 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 ZNF708P17019 499 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 FCGR2BP31994 310 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 TMEM91Q6ZNR0 172 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 GBGT1Q8N5D6 347 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 OR2T10Q8NGZ9 312 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 SIRT4Q9Y6E7 314 aaPredicted RBP7.04□□□□□ -1.28
SYNE2-220ENST00000555612 FOCADQ5VW36 1801 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 CLDN34H7C241 214 aa7.04□□□□□ -1.28
SYNE2-220ENST00000555612 UBE2L6O14933 153 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms