RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 C11orf54Q9H0W9 315 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-219ENST00000555563 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.88□□□□□ -0.67
SHMT2-219ENST00000555563 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
SHMT2-219ENST00000555563 ZNF230Q9UIE0 474 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-219ENST00000555563 ELF5Q9UKW6 265 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-219ENST00000555563 ITGB1BP1O14713 200 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 RAB29O14966 203 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 SMIM18P0DKX4 95 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 SCAND1P57086 179 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 LSM3P62310 102 aaKnown RBP10.87□□□□□ -0.67
SHMT2-219ENST00000555563 IGSF11Q5DX21 431 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 OR5AU1Q8NGC0 362 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 EDARADDQ8WWZ3 215 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 ABHD14BQ96IU4 210 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 PIPOXQ9P0Z9 390 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 ETV7Q9Y603 341 aa10.87□□□□□ -0.67
SHMT2-219ENST00000555563 TMEM235A6NFC5 223 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 BET1O15155 118 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 SCGNO76038 276 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 GSTT2P0CG29 244 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 GSTT2BP0CG30 244 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 TALDO1P37837 337 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 SERPINB10P48595 397 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 F2RL1P55085 397 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 ARL6IP1Q15041 203 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 NSUN5P1Q3KNT7 163 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 CDNFQ49AH0 187 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 SLC35E3Q7Z769 313 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 CENPVQ7Z7K6 275 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-219ENST00000555563 NDUFA11Q86Y39 141 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 FAM71E2Q8N5Q1 922 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 OR8H1Q8NGG4 311 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 FAM110DQ8TAY7 271 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-219ENST00000555563 NUDCD2Q8WVJ2 157 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 S1PR3Q99500 378 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 PLSCR3Q9NRY6 295 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 LIN7CQ9NUP9 197 aaKnown RBP10.86□□□□□ -0.67
SHMT2-219ENST00000555563 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 MEGF8Q7Z7M0 2845 aa10.86□□□□□ -0.67
SHMT2-219ENST00000555563 IGKV1D-8A0A087WSZ0 117 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 DIRAS3O95661 229 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 IGHG2P01859 326 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 GSTP1P09211 210 aaKnown RBP10.85□□□□□ -0.67
SHMT2-219ENST00000555563 DTYMKP23919 212 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 GPR12P47775 334 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 MMDQ15546 238 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 TCTEX1D4Q5JR98 221 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 HACD4Q5VWC8 232 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 FAM131AQ6UXB0 335 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 GLDNQ6ZMI3 551 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-219ENST00000555563 Q6ZS49 121 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 OR13F1Q8NGS4 319 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 NOL4LQ96MY1 436 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-219ENST00000555563 FUNDC2Q9BWH2 189 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 ABCG5Q9H222 651 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 RNF150Q9ULK6 438 aa10.85□□□□□ -0.67
SHMT2-219ENST00000555563 TRBV6-7A0A0A0MS04 114 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 A0A1W2PRX2 142 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 PSMB11A5LHX3 300 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 LINC01548A6NM66 108 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 CT45A6P0DMU7 189 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 CT45A5P0DMU8 189 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 CT45A7P0DMV0 189 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 RPS19P39019 145 aaKnown RBP10.84□□□□□ -0.67
SHMT2-219ENST00000555563 ACTBP60709 375 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 NCS1P62166 190 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 CD83Q01151 205 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 SRSF7Q16629 238 aaKnown RBP eCLIP10.84□□□□□ -0.67
SHMT2-219ENST00000555563 ZNF260Q3ZCT1 412 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 OR4X2Q8NGF9 303 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 OR10J5Q8NHC4 309 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 RITA1Q96K30 269 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 RASL11BQ9BPW5 248 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 TOLLIPQ9H0E2 274 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 GHITMQ9H3K2 345 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 LINC00527Q9UJ94 153 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 WNK1Q9H4A3 2382 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 MGAM2Q2M2H8 2515 aa10.84□□□□□ -0.67
SHMT2-219ENST00000555563 OR5H14A6NHG9 310 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 H0YJW9 148 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 SSX5O60225 188 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 TMEM127O75204 238 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 PROP1O75360 226 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 CNTFRP26992 372 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 GNG2P59768 71 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 PNLIPRP3Q17RR3 467 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 ZNF329Q86UD4 541 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 CROCCP3Q8IVE0 287 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 FOXRED2Q8IWF2 684 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 STPG2Q8N412 459 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 DRAXINQ8NBI3 349 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-219ENST00000555563 OR5AN1Q8NGI8 311 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 CHPT1Q8WUD6 406 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 PHF21AQ96BD5 680 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 GINS4Q9BRT9 223 aa10.83□□□□□ -0.68
SHMT2-219ENST00000555563 OR2D2Q9H210 308 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms