RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 KTN1-AS1Q86SY8 53 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 Q8N2B8 174 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 OR4A15Q8NGL6 344 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 ACBD6Q9BR61 282 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 VCX3BQ9H321 246 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 GLS2Q9UI32 602 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 HHLA2Q9UM44 414 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 MED12LQ86YW9 2145 aa0.02□□□□□ -2.41
SNX6-204ENST00000555541 A0A1W2PPV4 95 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 A0A1W2PQD3 144 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 SLC17A3O00476 420 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 CDIPTO14735 213 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 PHYHO14832 338 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 GEMIN2O14893 280 aaKnown RBP0.01□□□□□ -2.41
SNX6-204ENST00000555541 KDELR3O43731 214 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 SHOX2O60902 331 aaPredicted RBP0.01□□□□□ -2.41
SNX6-204ENST00000555541 CIAO1O76071 339 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 SNAI1O95863 264 aaPredicted RBP0.01□□□□□ -2.41
SNX6-204ENST00000555541 UCHL1P09936 223 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 OPRM1P35372 400 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 UGT2B10P36537 528 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 RANBP1P43487 201 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 XRCC4Q13426 336 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 TMEM31Q5JXX7 168 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 C7orf65Q6ZTY9 151 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 SLC36A1Q7Z2H8 476 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 DYNAPQ8N1N2 210 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 ACBD4Q8NC06 268 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 PGLYRP3Q96LB9 341 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 DOHHQ9BU89 302 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 MED18Q9BUE0 208 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 OR51E2Q9H255 320 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 RMND1Q9NWS8 449 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 DNAJC12Q9UKB3 198 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 SNURFQ9Y675 71 aa0.01□□□□□ -2.41
SNX6-204ENST00000555541 MGAT4DA6NG13 374 aa0□□□□□ -2.41
SNX6-204ENST00000555541 OR11H12B2RN74 326 aa0□□□□□ -2.41
SNX6-204ENST00000555541 TXNDC9O14530 226 aa0□□□□□ -2.41
SNX6-204ENST00000555541 UBE2L6O14933 153 aa0□□□□□ -2.41
SNX6-204ENST00000555541 POLR3GO15318 223 aaPredicted RBP0□□□□□ -2.41
SNX6-204ENST00000555541 SC5DO75845 299 aa0□□□□□ -2.41
SNX6-204ENST00000555541 ORM2P19652 201 aa0□□□□□ -2.41
SNX6-204ENST00000555541 CDK2P24941 298 aa0□□□□□ -2.41
SNX6-204ENST00000555541 DNMT1P26358 1616 aaKnown RBP0□□□□□ -2.41
SNX6-204ENST00000555541 CRYBB3P26998 211 aa0□□□□□ -2.41
SNX6-204ENST00000555541 REG1BP48304 166 aa0□□□□□ -2.41
SNX6-204ENST00000555541 ACTBP60709 375 aa0□□□□□ -2.41
SNX6-204ENST00000555541 DYNLL1P63167 89 aaKnown RBP0□□□□□ -2.41
SNX6-204ENST00000555541 ACTG1P63261 375 aa0□□□□□ -2.41
SNX6-204ENST00000555541 LGALS9BQ3B8N2 356 aa0□□□□□ -2.41
SNX6-204ENST00000555541 SPATA31B1PQ5VZV4 182 aa0□□□□□ -2.41
SNX6-204ENST00000555541 DRAM2Q6UX65 266 aa0□□□□□ -2.41
SNX6-204ENST00000555541 ALPK2Q86TB3 2170 aa0□□□□□ -2.41
SNX6-204ENST00000555541 DOLPP1Q86YN1 238 aa0□□□□□ -2.41
SNX6-204ENST00000555541 SYS1Q8N2H4 156 aa0□□□□□ -2.41
SNX6-204ENST00000555541 CNEP1R1Q8N9A8 125 aa0□□□□□ -2.41
SNX6-204ENST00000555541 OR11H2Q8NH07 326 aa0□□□□□ -2.41
SNX6-204ENST00000555541 MBD3L1Q8WWY6 194 aa0□□□□□ -2.41
SNX6-204ENST00000555541 KIAA1143Q96AT1 154 aaPredicted RBP0□□□□□ -2.41
SNX6-204ENST00000555541 TRNT1Q96Q11 434 aaKnown RBP0□□□□□ -2.41
SNX6-204ENST00000555541 MRPL57Q9BQC6 102 aaKnown RBP0□□□□□ -2.41
SNX6-204ENST00000555541 TAS2R13Q9NYV9 303 aa0□□□□□ -2.41
SNX6-204ENST00000555541 WDR90Q96KV7 1748 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 RAB3GAP2Q9H2M9 1393 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 HMSDA8MTL9 139 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 CASC3O15234 703 aaKnown RBP-0.01□□□□□ -2.41
SNX6-204ENST00000555541 KLRC4O43908 158 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 VAPBO95292 243 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 MBP02144 154 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 BGNP21810 368 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 DEKP35659 375 aaKnown RBP-0.01□□□□□ -2.41
SNX6-204ENST00000555541 CCR2P41597 374 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 PSMB3P49720 205 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 FAM3AP98173 230 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 ELOBQ15370 118 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 MOGQ16653 247 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 Q1T7F1 81 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 HSP90AA4PQ58FG1 418 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 AMTNQ6UX39 209 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 Q6ZT83 130 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 SLC13A5Q86YT5 568 aaPredicted RBP-0.01□□□□□ -2.41
SNX6-204ENST00000555541 PDCL2Q8N4E4 241 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 OR51T1Q8NGJ9 327 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 STMN3Q9NZ72 180 aa-0.01□□□□□ -2.41
SNX6-204ENST00000555541 ABCB11O95342 1321 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 BHLHE40O14503 412 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CYTH3O43739 400 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 ORC5O43913 435 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 STK16O75716 305 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 SERPINA7P05543 415 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CD7P09564 240 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 GADD45AP24522 165 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 RCVRNP35243 200 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 AQP4P55087 323 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 ATP5J2P56134 94 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 TAS2R30P59541 319 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 TRMT12Q53H54 448 aaKnown RBP-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CAVIN4Q5BKX8 364 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CENPWQ5EE01 88 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms