RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ELP2Q6IA86 826 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 Q6ZS49 121 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 IL17RELQ6ZVW7 336 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 LURAP1LQ8IV03 231 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 H1FXQ92522 213 aaKnown RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 DCUN1D4Q92564 292 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 AQP10Q96PS8 301 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 NRIP2Q9BQI9 281 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 FAAP24Q9BTP7 215 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 RNF126Q9BV68 326 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 SHARPINQ9H0F6 387 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 METTL8Q9H825 291 aaKnown RBP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 ZNF286AQ9HBT8 521 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 HIF1ANQ9NWT6 349 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 CLN8Q9UBY8 286 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 ST3GAL6Q9Y274 331 aa8.18□□□□□ -1.1
PSEN1-213ENST00000555386 NIPBLQ6KC79 2804 aaeCLIP8.18□□□□□ -1.1
PSEN1-213ENST00000555386 IGKV1D-8A0A087WSZ0 117 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 NUDT19A8MXV4 375 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 DVL1O14640 695 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 TAAR5O14804 337 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 SFTPBP07988 381 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 NDUFB7P17568 137 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 FUT3P21217 361 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 PRDX2P32119 198 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 ATXN7L3Q14CW9 347 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-213ENST00000555386 FAM58AQ8N1B3 248 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 STPG2Q8N412 459 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 CD177Q8N6Q3 437 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 ZNRF1Q8ND25 227 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 MAFIPQ8WZ33 124 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 GALNT14Q96FL9 552 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 GAFA1Q96PS6 74 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 SULT4A1Q9BR01 284 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 C12orf4Q9NQ89 552 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 MMP26Q9NRE1 261 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 KCNS2Q9ULS6 477 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 KCNIP3Q9Y2W7 256 aa8.17□□□□□ -1.1
PSEN1-213ENST00000555386 FN1P02751 2386 aaKnown RBP8.17□□□□□ -1.1
PSEN1-213ENST00000555386 SETD2Q9BYW2 2564 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-213ENST00000555386 NSD1Q96L73 2696 aaPredicted RBP8.17□□□□□ -1.1
PSEN1-213ENST00000555386 MEX3AA1L020 520 aaKnown RBP8.16□□□□□ -1.1
PSEN1-213ENST00000555386 INAFM1C9JVW0 142 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 SIRPB1O00241 398 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 GEMIN2O14893 280 aaKnown RBP8.16□□□□□ -1.1
PSEN1-213ENST00000555386 FGF16O43320 207 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 NDUFB3O43676 98 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 NDUFA2O43678 99 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 FOXH1O75593 365 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 ADAP1O75689 374 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 IFNA21P01568 189 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 ZNF728P0DKX0 622 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 PI3P19957 117 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 WDR25Q64LD2 544 aaPredicted RBP8.16□□□□□ -1.1
PSEN1-213ENST00000555386 FIP1L1Q6UN15 594 aaKnown RBP8.16□□□□□ -1.1
PSEN1-213ENST00000555386 UQCC3Q6UW78 93 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 LINC00596Q86U02 117 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 BAP18Q8IXM2 172 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 SLC38A6Q8IZM9 456 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 LRTM2Q8N967 370 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 TMEM186Q96B77 213 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 SUCNR1Q9BXA5 334 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 ZFP57Q9NU63 452 aa8.16□□□□□ -1.1
PSEN1-213ENST00000555386 LOC105371242A0A075B767 164 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 RAB19A4D1S5 217 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-213ENST00000555386 H0YIZ8 118 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 TEX46H3BTG2 121 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 HSPB6O14558 160 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-213ENST00000555386 FCN3O75636 299 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 HAND1O96004 215 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 KNG1P01042 644 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 GLP1RP43220 463 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 FGF12P61328 243 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 ERVK11-1P61568 191 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 COL10A1Q03692 680 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 RBM39Q14498 530 aaKnown RBP8.15□□□□□ -1.1
PSEN1-213ENST00000555386 MPV17LQ2QL34 196 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 CR1LQ2VPA4 569 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 PIGYQ3MUY2 71 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 ABCA11PQ4W5N1 156 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 LRRC10Q5BKY1 277 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 ZNF841Q6ZN19 808 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 ZNF788Q6ZQV5 615 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 Q8IYB0 196 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 FAM185AQ8N0U4 392 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 CCDC71LQ8N9Z2 235 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 MOB3AQ96BX8 217 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 OR10C1Q96KK4 312 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 LINC00052Q96N35 136 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 HDHD3Q9BSH5 251 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-213ENST00000555386 NAA60Q9H7X0 242 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 RHOFQ9HBH0 211 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 HES4Q9HCC6 221 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 SLC25A10Q9UBX3 287 aaPredicted RBP8.15□□□□□ -1.1
PSEN1-213ENST00000555386 NAV3Q8IVL0 2385 aa8.15□□□□□ -1.1
PSEN1-213ENST00000555386 DSCAML1Q8TD84 2053 aa8.15□□□□□ -1.11
PSEN1-213ENST00000555386 TRAV20A0A0B4J274 112 aa8.14□□□□□ -1.11
PSEN1-213ENST00000555386 C22orf46C9J442 243 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms