RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 Q6ZPA2 131 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 ZNF695Q8IW36 515 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 NPBQ8NG41 125 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 IL1F10Q8WWZ1 152 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 FCGR1BQ92637 280 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 P2RX4Q99571 388 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 RNF5Q99942 180 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 ZNF251Q9BRH9 671 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 AGMATQ9BSE5 352 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 MRPL20Q9BYC9 149 aaKnown RBP9.31□□□□□ -0.92
VRK1-204ENST00000555351 KCNK15Q9H427 330 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 Q9N2K0 584 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 AK3Q9UIJ7 227 aa9.31□□□□□ -0.92
VRK1-204ENST00000555351 LINC01548A6NM66 108 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 IFITM5A6NNB3 132 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 NBR2O15453 112 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 RBBP9O75884 186 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 NDUFA3O95167 84 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 IGLL1P15814 213 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 RAB6AP20340 208 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 VDAC1P21796 283 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 MYL9P24844 172 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 VEGFCP49767 419 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 ACTBP60709 375 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 ARL6IP1Q15041 203 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 MMDQ15546 238 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 FOXB2Q5VYV0 432 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 ETV3LQ6ZN32 361 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 MRPL41Q8IXM3 137 aaKnown RBP9.3□□□□□ -0.92
VRK1-204ENST00000555351 ARHGAP5-AS1Q96IT6 56 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 CYYR1Q96J86 154 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 CMSS1Q9BQ75 279 aaKnown RBP9.3□□□□□ -0.92
VRK1-204ENST00000555351 PECRQ9BY49 303 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 TOLLIPQ9H0E2 274 aa9.3□□□□□ -0.92
VRK1-204ENST00000555351 ZMAT5Q9UDW3 170 aaKnown RBP9.3□□□□□ -0.92
VRK1-204ENST00000555351 ZNF107Q9UII5 783 aaPredicted RBP9.3□□□□□ -0.92
VRK1-204ENST00000555351 NUDT19A8MXV4 375 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 GADD45AP24522 165 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 PSMB8P28062 276 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 FGF9P31371 208 aaPredicted RBP9.29□□□□□ -0.92
VRK1-204ENST00000555351 OR3A3P47888 321 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 CLDN12P56749 244 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 EGFEM1PQ0D2K5 195 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 KIR2DS1Q14954 304 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 SRSF7Q16629 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
VRK1-204ENST00000555351 C5orf64Q2M2E5 130 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 PLAC9Q5JTB6 97 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.29□□□□□ -0.92
VRK1-204ENST00000555351 KLHL30-AS1Q8NEE0 82 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 OR5AN1Q8NGI8 311 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 OR4A4PQ8NGN8 299 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 SETD6Q8TBK2 473 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 MYOZ3Q8TDC0 251 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 RAB3CQ96E17 227 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 HSPB9Q9BQS6 159 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 OR51J1Q9H342 316 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 KIAA1456Q9P272 454 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 LINC00527Q9UJ94 153 aa9.29□□□□□ -0.92
VRK1-204ENST00000555351 TMEM272A0A1B0GTI8 110 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 METTL21EPA6NDL7 271 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 TRDCB7Z8K6 153 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 ST8SIA5O15466 376 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 HSPA12AO43301 675 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 CD3GP09693 182 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 CT45A6P0DMU7 189 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 CT45A5P0DMU8 189 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 CT45A7P0DMV0 189 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 RAB3BP20337 219 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 PPIFP30405 207 aaKnown RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 CEACAM6P40199 344 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 CRIP2P52943 208 aaPredicted RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 MRPS15P82914 257 aaKnown RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 LIN54Q6MZP7 749 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 Q6ZS49 121 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 C5orf24Q7Z6I8 188 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 TPRA1Q86W33 373 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 SPARTQ8N0X7 666 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 TCTEX1D1Q8N7M0 179 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 OR8U1Q8NH10 309 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 DPF1Q92782 380 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 HDHD3Q9BSH5 251 aaPredicted RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 C11orf54Q9H0W9 315 aaPredicted RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 AURKAIP1Q9NWT8 199 aaPredicted RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 GAB2Q9UQC2 676 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 WASHC3Q9Y3C0 194 aa9.28□□□□□ -0.92
VRK1-204ENST00000555351 PRKDCP78527 4128 aaKnown RBP9.28□□□□□ -0.92
VRK1-204ENST00000555351 H0YJW9 148 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 CCL24O00175 119 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 RAB27BO00194 218 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 MFNGO00587 321 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 IGLV1-40P01703 118 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 RPLP1P05386 114 aaKnown RBP9.27□□□□□ -0.93
VRK1-204ENST00000555351 SCTP09683 121 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 RUNX1Q01196 453 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 TAGLNQ01995 201 aaKnown RBP9.27□□□□□ -0.93
VRK1-204ENST00000555351 HES5Q5TA89 166 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 ZNF660Q6AZW8 331 aaPredicted RBP9.27□□□□□ -0.93
VRK1-204ENST00000555351 FAM131AQ6UXB0 335 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 C8orf86Q6ZUL3 223 aa9.27□□□□□ -0.93
VRK1-204ENST00000555351 OR10R2Q8NGX6 335 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms