RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 D6RAR5 112 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 GOLGA6L19H0YKK7 550 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 H3BQ85 93 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 C15orf65H3BRN8 121 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 ISLRO14498 428 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 CRXO43186 299 aaPredicted RBP2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 CXCL8P10145 99 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 M6PRP20645 277 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 KLF3P57682 345 aaPredicted RBP2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 HBG1P69891 147 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 HBG2P69892 147 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 CD164Q04900 197 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 SYCP1Q15431 976 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 GOLGA7BQ2TAP0 167 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 SPIN3Q5JUX0 258 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZNF660Q6AZW8 331 aaPredicted RBP2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 LAMTOR1Q6IAA8 161 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 AHSA2Q719I0 299 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 DPPA2Q7Z7J5 298 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 MRPL52Q86TS9 123 aaKnown RBP2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 LRRC6Q86X45 466 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 C10orf107Q8IVU9 208 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 TCAIMQ8N3R3 496 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 OR2AE1Q8NHA4 323 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 TMIGD2Q96BF3 282 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 CCDC127Q96BQ5 260 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 OLFM3Q96PB7 478 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 ABCG5Q9H222 651 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 TXNIPQ9H3M7 391 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 RHOFQ9HBH0 211 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 ASF1BQ9NVP2 202 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 ICOSQ9Y6W8 199 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 R4GN34 69 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 FAM208BQ5VWN6 2430 aa2.72□□□□□ -1.97
CKS1BP1-201ENST00000555221 ZFHX2Q9C0A1 2572 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 LRRC37A2A6NM11 1700 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 SHROOM3Q8TF72 1996 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 IGKV1OR2-108A0A075B7D4 117 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 A0A1W2PRG6 482 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 F5H5P2 479 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 H3BP45 60 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 I3L4J1 428 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 FABP7O15540 132 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 KLRC4O43908 158 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 ASS1P00966 412 aaKnown RBP2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 HLA-AP01891 365 aaKnown RBP2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 PAEPP09466 180 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 SPAM1P38567 509 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 RAB25P57735 213 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 IHHQ14623 411 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 EXOC3L4Q17RC7 722 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 DEFB134Q4QY38 66 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 NXNL2Q5VZ03 156 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 COMTD1Q86VU5 262 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 OR2M3Q8NG83 312 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 ANP32BQ92688 251 aaKnown RBP2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 FXYD5Q96DB9 178 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 OTUB2Q96DC9 234 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 MED10Q9BTT4 135 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZNF436Q9C0F3 470 aaPredicted RBP2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 IFT46Q9NQC8 304 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZNF391Q9UJN7 358 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 COQ4Q9Y3A0 265 aa2.71□□□□□ -1.98
CKS1BP1-201ENST00000555221 PRRC2BQ5JSZ5 2229 aaKnown RBP2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 NOTCH2Q04721 2471 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZSWIM8A7E2V4 1837 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 COL4A6Q14031 1691 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 USP24Q9UPU5 2620 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 RNASEK-C17orf49H0YIS7 233 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 M0QXV9 152 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 PDCD6O75340 191 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 IGHV3-53P01767 116 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 HLA-DRAP01903 254 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 GTF2F2P13984 249 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 HRES1P13985 223 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 COL8A2P25067 703 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 CNTFRP26992 372 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 TSPOP30536 169 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 ARPP19P56211 112 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 MYL5Q02045 173 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 TAF9Q16594 264 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 PDZD11Q5EBL8 140 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 AMMECR1LQ6DCA0 310 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZFP82Q8N141 532 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 TET1Q8NFU7 2136 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 OR5P2Q8WZ92 322 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 PYURFQ96I23 114 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 LINC01587Q99440 93 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 ULBP1Q9BZM6 244 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 MFSD1Q9H3U5 465 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 ZNHIT6Q9NWK9 470 aaKnown RBP2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 POFUT2Q9Y2G5 429 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 DOPEY1Q5JWR5 2465 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 FBN3Q75N90 2809 aa2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 HELZ2Q9BYK8 2649 aaKnown RBP2.7□□□□□ -1.98
CKS1BP1-201ENST00000555221 MICAL3Q7RTP6 2002 aa2.69□□□□□ -1.98
CKS1BP1-201ENST00000555221 MYO7AQ13402 2215 aa2.69□□□□□ -1.98
CKS1BP1-201ENST00000555221 A0A1W2PNN7 141 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms