RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 TAS2R60P59551 318 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 ERVFRD-1P60508 538 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 PNRC1Q12796 327 aaPredicted RBP12.53□□□□□ -0.4
XRCC3-211ENST00000555055 ICAM4Q14773 271 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 TPRX1Q8N7U7 411 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 TRAV1-1A0A0B4J248 108 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 TNFSF13O75888 250 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 NXPH2O95156 264 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 HOXC12P31275 282 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 DPPA2Q7Z7J5 298 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 FAM185AQ8N0U4 392 aa12.53□□□□□ -0.4
XRCC3-211ENST00000555055 OR5B21A6NL26 309 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 AQP7O14520 342 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 BAXQ07812 192 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 IL24Q13007 206 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 GUSBP1Q15486 140 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 MPV17LQ2QL34 196 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 PCSK4Q6UW60 755 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 SARAFQ96BY9 339 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 SPIN2AQ99865 258 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 SPIN2BQ9BPZ2 258 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 C2orf88Q9BSF0 95 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 PLEKHF2Q9H8W4 249 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.4
XRCC3-211ENST00000555055 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.4
XRCC3-211ENST00000555055 WSB1Q9Y6I7 421 aa12.52□□□□□ -0.4
XRCC3-211ENST00000555055 TRDCB7Z8K6 153 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 J3QT63 122 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 SOD3P08294 240 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 RAB4BP61018 213 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 OR8G1Q15617 311 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 CDPF1Q6NVV7 123 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 Q6P435 159 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 SAXO1Q8IYX7 474 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 S100PBPQ96BU1 408 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 STARD4Q96DR4 205 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 RTL8AQ9BWD3 113 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 LYRM2Q9NU23 88 aaPredicted RBP12.52□□□□□ -0.41
XRCC3-211ENST00000555055 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 PKDREJQ9NTG1 2253 aa12.52□□□□□ -0.41
XRCC3-211ENST00000555055 SPTBN4Q9H254 2564 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 POLEQ07864 2286 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 DUXBA0A1W2PPF3 345 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 ZNF727A8MUV8 499 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 OMGP23515 440 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 CCL20P78556 96 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 MRPL49Q13405 166 aaKnown RBP12.51□□□□□ -0.41
XRCC3-211ENST00000555055 VHLLQ6RSH7 139 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 C1orf87Q8N0U7 546 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 ZADH2Q8N4Q0 377 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 RBM14Q96PK6 669 aaKnown RBP12.51□□□□□ -0.41
XRCC3-211ENST00000555055 USF3Q68DE3 2245 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 ZNF891A8MT65 544 aaPredicted RBP12.51□□□□□ -0.41
XRCC3-211ENST00000555055 PSPNO60542 156 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 TLE4Q04727 773 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 HAGHQ16775 308 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 Q6ZR03 302 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 LRP11Q86VZ4 500 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 CLDND2Q8NHS1 167 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 RNASEH2CQ8TDP1 164 aaKnown RBP12.51□□□□□ -0.41
XRCC3-211ENST00000555055 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 SH3BGRL2Q9UJC5 107 aa12.51□□□□□ -0.41
XRCC3-211ENST00000555055 CLEC18AA5D8T8 446 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 PRR33A8MZF0 331 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 LY86O95711 162 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 EPHA1P21709 976 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 HLA-DRB3P79483 266 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 MSMPQ1L6U9 139 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 CXorf66Q5JRM2 361 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-211ENST00000555055 ZNF343Q6P1L6 599 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 CLEC18CQ8NCF0 446 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 PLPPR2Q96GM1 343 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 POM121Q96HA1 1249 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 METRNQ9UJH8 293 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TRBV24-1A0A075B6N3 115 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 A0A1B0GV50 99 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 A0A1B0GV90 55 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 PHOX2AO14813 284 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 CYB5BO43169 146 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 ADAM20O43506 726 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TIMM8AO60220 97 aaPredicted RBP12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TRGC2P03986 189 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 ZNF83P51522 516 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 GAMTQ14353 236 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 C22orf34Q6ZV56 151 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TMEM56Q96MV1 263 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 PPP1R3CQ9UQK1 317 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
XRCC3-211ENST00000555055 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
XRCC3-211ENST00000555055 IGSF23A1L1A6 192 aa12.49□□□□□ -0.41
XRCC3-211ENST00000555055 FAM90A10PA6NDY2 464 aa12.49□□□□□ -0.41
XRCC3-211ENST00000555055 FAM90A18PA6NE21 464 aa12.49□□□□□ -0.41
XRCC3-211ENST00000555055 FAM90A16PA6NEW6 464 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms