RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FASLGP48023 281 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 RAB7AP51149 207 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 ID3Q02535 119 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 WDR5BQ86VZ2 330 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 KMT5CQ86Y97 462 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 OR2M3Q8NG83 312 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 TMEM170AQ8WVE7 144 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 OR6C3Q9NZP0 311 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 GPR179Q6PRD1 2367 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 C5orf49A4QMS7 147 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 RAMP3O60896 148 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 KBTBD11O94819 623 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 NGFP01138 241 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 IGKV1-39P01597 117 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 IGKV1D-39P04432 117 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 PSG4Q00888 419 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 FXYD3Q14802 87 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 MRGPRGQ86SM5 289 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 CARFQ8N187 725 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 RFESDQ8TAC1 157 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 ABHD3Q8WU67 409 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 NABP1Q96AH0 204 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 RASL10BQ96S79 203 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 DEPPQ9NTK1 212 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 RYDENQ9NUL5 291 aaKnown RBP7.56□□□□□ -1.2
SYNE2-217ENST00000555022 BLACEA4D250 179 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 AQP7P3A6NL99 342 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 IGKV1-5P01602 117 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 F2RP25116 425 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 HNRNPKP61978 463 aaKnown RBP eCLIP7.56□□□□□ -1.2
SYNE2-217ENST00000555022 ZNF90Q03938 601 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 PNRC1Q12796 327 aaPredicted RBP7.56□□□□□ -1.2
SYNE2-217ENST00000555022 ZNF441Q8N8Z8 693 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 SSMEM1Q8WWF3 244 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 TAF15Q92804 592 aaKnown RBP eCLIP7.56□□□□□ -1.2
SYNE2-217ENST00000555022 MRGPRX4Q96LA9 322 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 ANGPTL4Q9BY76 406 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 RNF115Q9Y4L5 304 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 KIAA1549Q9HCM3 1950 aa7.56□□□□□ -1.2
SYNE2-217ENST00000555022 B4DEV8 164 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 RHBDL1O75783 438 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 CLDN14O95500 239 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 PTTG1IPP53801 180 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 Q6ZN92 141 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 NHLRC2Q8NBF2 726 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 PSMF1Q92530 271 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 CIB3Q96Q77 187 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-217ENST00000555022 HINT2Q9BX68 163 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 C11orf1Q9H5F2 150 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 TMEM131Q92545 1883 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 IGHV1OR21-1A0A087WYE8 117 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 A0A1B0GW64 132 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 RBFOX2O43251 390 aaKnown RBP eCLIP7.55□□□□□ -1.2
SYNE2-217ENST00000555022 ZG16O60844 167 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 ACTL6BO94805 426 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 SLC25A6P12236 298 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 RAB4AP20338 218 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 CD82P27701 267 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-217ENST00000555022 CYP2G1PQ6ZSU1 146 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 AAED1Q7RTV5 226 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 STPG4Q8N801 248 aa7.55□□□□□ -1.2
SYNE2-217ENST00000555022 ZDBF2Q9HCK1 2354 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 LOC102725191A0A1B0GVB3 256 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 SCRG1O75711 98 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 OR10J1P30954 320 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 CEACAM8P31997 349 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 BRS3P32247 399 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 LHX2P50458 406 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 PRDX4Q13162 271 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 RAB35Q15286 201 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 HLA-DRB5Q30154 266 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 ACTL10Q5JWF8 245 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 C1orf194Q5T5A4 169 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 MRPL54Q6P161 138 aaKnown RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 ARL6IP6Q8N6S5 226 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 LRTM2Q8N967 370 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 OR1L1Q8NH94 360 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 ZCCHC14Q8WYQ9 949 aaKnown RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 FGF23Q9GZV9 251 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 PTPRSQ13332 1948 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 CADP27708 2225 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 MED12LQ86YW9 2145 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 A0A1W2PPC4 97 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 TRAPPC2LH3BP13 241 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 M0QZ24 198 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 FCN1O00602 326 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 PTGDSP41222 190 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 C3AR1Q16581 482 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 KCNIP4Q6PIL6 250 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 VHLLQ6RSH7 139 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 LHFPL2Q6ZUX7 228 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 VKORC1L1Q8N0U8 176 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 TSTD1Q8NFU3 115 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 SPSB1Q96BD6 273 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 UHRF2Q96PU4 802 aa7.54□□□□□ -1.2
SYNE2-217ENST00000555022 WDR61Q9GZS3 305 aaKnown RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 ZNF552Q9H707 407 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-217ENST00000555022 TMEM9BQ9NQ34 198 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms