RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 FAM19A5Q7Z5A7 132 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-213ENST00000554776 DNAAF3Q8N9W5 541 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 OR10P1Q8NGE3 313 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 OR10D3Q8NH80 312 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 SMIM19Q96E16 107 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 DERL2Q9GZP9 239 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 SLC22A4Q9H015 551 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 C16orf95Q9H693 158 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 HSPE1-MOB4S4R3N1 261 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 COL5A1P20908 1838 aaPredicted RBP1.44□□□□□ -2.18
SCFD1-213ENST00000554776 ADAMTSL1Q8N6G6 1762 aa1.44□□□□□ -2.18
SCFD1-213ENST00000554776 LTBP2Q14767 1821 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 C19orf71A6NCJ1 209 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 G3V3Q6 166 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 ZNF73O43830 326 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CRTAPO75718 401 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CRYBA1P05813 215 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 ESDP10768 282 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CPMP14384 443 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 HIST1H1CP16403 213 aaKnown RBP1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CD36P16671 472 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 MIPP30301 263 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CDC34P49427 236 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-213ENST00000554776 EMP2P54851 167 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 PPP1R1AQ13522 171 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 MRPL51Q4U2R6 128 aaKnown RBP1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CDKL4Q5MAI5 379 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 SMARCD3Q6STE5 483 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 ZNF567Q8N184 647 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 TMEM156Q8N614 296 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 PACRGLQ8N7B6 248 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 OR11H1Q8NG94 326 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 EEF1AKMT1Q8WVE0 214 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 ASB13Q8WXK3 278 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 TLCD1Q96CP7 247 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CMTM5Q96DZ9 223 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 CAPZA3Q96KX2 299 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 KCTD7Q96MP8 289 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 OR52B2Q96RD2 323 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 FIS1Q9Y3D6 152 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 MINOS1-NBL1R4GNA1 71 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 BRD4O60885 1362 aaPredicted RBP1.43□□□□□ -2.18
SCFD1-213ENST00000554776 KMT2EQ8IZD2 1858 aa1.43□□□□□ -2.18
SCFD1-213ENST00000554776 TRPM6Q9BX84 2022 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 PLCH2O75038 1416 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 NPATQ14207 1427 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 A0A0A6YYH2 397 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 A6NJ64 397 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 M0R381 172 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 COPEO14579 308 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 DENRO43583 198 aaKnown RBP1.42□□□□□ -2.18
SCFD1-213ENST00000554776 LY6HO94772 140 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 TYMSP04818 313 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 IL6P05231 212 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 REG1AP05451 166 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 NQO1P15559 274 aaKnown RBP1.42□□□□□ -2.18
SCFD1-213ENST00000554776 SLC25A16P16260 332 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 GZMHP20718 246 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 MAGEA2P43356 314 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 GZMMP51124 257 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 GNA13Q14344 377 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 SAPCD1Q5SSQ6 148 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 RASL11AQ6T310 242 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 NAA40Q86UY6 237 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 KRTAP13-1Q8IUC0 172 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 BAP18Q8IXM2 172 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 C1orf174Q8IYL3 243 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 OR8K1Q8NGG5 319 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 OR51H1Q8NH63 302 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 OR10A6Q8NH74 314 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 Q8WTZ3 238 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 OR7D2Q96RA2 312 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 TBX5Q99593 518 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 MGLLQ99685 303 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 DHRS9Q9BPW9 319 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 UPK3BQ9BT76 320 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 C1QTNF6Q9BXI9 259 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 CDCA4Q9BXL8 241 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 GNB1LQ9BYB4 327 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 EIF5A2Q9GZV4 153 aaKnown RBP1.42□□□□□ -2.18
SCFD1-213ENST00000554776 AICDAQ9GZX7 198 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 LRRC19Q9H756 370 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 UBQLN4Q9NRR5 601 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 NKIRAS1Q9NYS0 192 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 A0A1W2PP64 1363 aa1.42□□□□□ -2.18
SCFD1-213ENST00000554776 PTPRJQ12913 1337 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 J3QRE1 110 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 DEXIO95424 95 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 IGLV3-27P01718 113 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 CBR1P16152 277 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 CRYBB3P26998 211 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 OR10J1P30954 320 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 LPAR6P43657 344 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 SERPINB10P48595 397 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 AKR1C2P52895 323 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 TSPEAR-AS2P59090 65 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 FGF12P61328 243 aa1.41□□□□□ -2.18
SCFD1-213ENST00000554776 MLLT11Q13015 90 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-213ENST00000554776 JOSD1Q15040 202 aaPredicted RBP1.41□□□□□ -2.18
SCFD1-213ENST00000554776 ACSBG2Q5FVE4 666 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms