RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CDNFQ49AH0 187 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 RNASE10Q5GAN6 216 aaKnown RBP7.15□□□□□ -1.26
TDP1-208ENST00000553989 FAM76BQ5HYJ3 339 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 ACP7Q6ZNF0 438 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 LHFPL4Q7Z7J7 247 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 ZNF546Q86UE3 836 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 TMEM219Q86XT9 240 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 BATF2Q8N1L9 274 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 ZNF561Q8N587 486 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 JAGN1Q8N5M9 183 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 OR51A4Q8NGJ6 313 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 KCNG3Q8TAE7 436 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 FGGYQ96C11 551 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 SDSLQ96GA7 329 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 ZNF488Q96MN9 340 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 OR51I2Q9H344 312 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 ZNF702PQ9H963 129 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.26
TDP1-208ENST00000553989 SDHAF2Q9NX18 166 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 RASL12Q9NYN1 266 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 SHPKQ9UHJ6 478 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 PIGLQ9Y2B2 252 aa7.15□□□□□ -1.26
TDP1-208ENST00000553989 PLXNB1O43157 2135 aa7.15□□□□□ -1.27
TDP1-208ENST00000553989 FXYD6-FXYD2A0A087WZ82 144 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 LOC107986453A0A1B0GWG9 222 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 KANTRA0A1W2PQU2 76 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 A0A1W2PRX2 142 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 MFSD2BA6NFX1 497 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 F2RL2O00254 374 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ARPC5O15511 151 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 MTRF1O75570 445 aaKnown RBP7.14□□□□□ -1.27
TDP1-208ENST00000553989 NXPH2O95156 264 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 PF4V1P10720 104 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 FAHP16930 419 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ZNF20P17024 532 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ZP3P21754 424 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 PRDX2P32119 198 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 NUP62P37198 522 aaPredicted RBP7.14□□□□□ -1.27
TDP1-208ENST00000553989 HAAOP46952 286 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 RAB13P51153 203 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ZNF345Q14585 488 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ZNF273Q14593 569 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 CNN3Q15417 329 aaKnown RBP7.14□□□□□ -1.27
TDP1-208ENST00000553989 TMEM200BQ69YZ2 307 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ZNF529Q6P280 563 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 CRIP3Q6Q6R5 217 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 ACOT7LQ6ZUV0 252 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 LYG2Q86SG7 212 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 NDUFA11Q86Y39 141 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 STPG2Q8N412 459 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 KCNRGQ8N5I3 272 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 OR5A2Q8NGI9 324 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 OR13D1Q8NGV5 346 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 THAP6Q8TBB0 222 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 PHB2Q99623 299 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 CITED2Q99967 270 aaPredicted RBP7.14□□□□□ -1.27
TDP1-208ENST00000553989 PRSS22Q9GZN4 317 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 PBOV1Q9GZY1 135 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 FXYD6Q9H0Q3 95 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 GPR84Q9NQS5 396 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 PITPNC1Q9UKF7 332 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 TCF19Q9Y242 345 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 POLDIP2Q9Y2S7 368 aa7.14□□□□□ -1.27
TDP1-208ENST00000553989 A0A1B0GTI1 187 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 MEX3AA1L020 520 aaKnown RBP7.13□□□□□ -1.27
TDP1-208ENST00000553989 TEX46H3BTG2 121 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 J3QT63 122 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 RAB27BO00194 218 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 SYNGR1O43759 233 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 CA11O75493 328 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 MPIG6BO95866 241 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 NRASP01111 189 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 FCER2P06734 321 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 NMBP08949 121 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 VSIG8P0DPA2 414 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 PTHLHP12272 177 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 NAT1P18440 290 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 VDAC2P45880 294 aaPredicted RBP7.13□□□□□ -1.27
TDP1-208ENST00000553989 EDDM3BP56851 147 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 H2BFSP57053 126 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 MFGE8Q08431 387 aaPredicted RBP7.13□□□□□ -1.27
TDP1-208ENST00000553989 PLA2G7Q13093 441 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 SSX2Q16385 188 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 OVCH2Q7RTZ1 564 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 TMEM17Q86X19 198 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 ANGPTL5Q86XS5 388 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 ZNF573Q86YE8 665 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 CD177Q8N6Q3 437 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 POC1AQ8NBT0 407 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 INO80EQ8NBZ0 244 aaPredicted RBP7.13□□□□□ -1.27
TDP1-208ENST00000553989 CHST4Q8NCG5 386 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 OR52B4Q8NGK2 314 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 OR5M8Q8NGP6 311 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 OR10R2Q8NGX6 335 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 TERB2Q8NHR7 220 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 OR51E1Q8TCB6 317 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 MITD1Q8WV92 249 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 C10orf35Q96D05 121 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 AJUBAQ96IF1 538 aa7.13□□□□□ -1.27
TDP1-208ENST00000553989 URM1Q9BTM9 101 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms