RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SIGIRRQ6IA17 410 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 GHSRQ92847 366 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 CCDC124Q96CT7 223 aaKnown RBP6.75□□□□□ -1.33
PRKCH-208ENST00000553846 WDR89Q96FK6 387 aaPredicted RBP6.75□□□□□ -1.33
PRKCH-208ENST00000553846 YPEL2Q96QA6 119 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 PDCD1LG2Q9BQ51 273 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 OR2S2Q9NQN1 319 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 ZNF446Q9NWS9 450 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 TAS2R4Q9NYW5 299 aa6.75□□□□□ -1.33
PRKCH-208ENST00000553846 TCRBV3S1A0A5B6 114 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 AIREO43918 545 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 RBBP9O75884 186 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 NDUFB8O95169 186 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 SPDEFO95238 335 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 IGKV1-16P04430 117 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 CRYGBP07316 175 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 RAB3AP20336 220 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 POLR2IP36954 125 aaKnown RBP6.74□□□□□ -1.33
PRKCH-208ENST00000553846 RPEL1Q2QD12 228 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 RPL39P5Q59GN2 51 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 TRAT1Q6PIZ9 186 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 GLDNQ6ZMI3 551 aaPredicted RBP6.74□□□□□ -1.33
PRKCH-208ENST00000553846 Q6ZWC4 215 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 BVESQ8NE79 360 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 OR8J1Q8NGP2 316 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 MRPL30Q8TCC3 161 aaKnown RBP6.74□□□□□ -1.33
PRKCH-208ENST00000553846 ABHD5Q8WTS1 349 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 PHLDA1Q8WV24 401 aaPredicted RBP6.74□□□□□ -1.33
PRKCH-208ENST00000553846 CPNE2Q96FN4 548 aaPredicted RBP6.74□□□□□ -1.33
PRKCH-208ENST00000553846 C4orf36Q96KX1 117 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 RNF5Q99942 180 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 AGMATQ9BSE5 352 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 FAM192AQ9GZU8 254 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 GABARAPL1Q9H0R8 117 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 RAB9BQ9NP90 201 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 METTL1Q9UBP6 276 aaKnown RBP6.74□□□□□ -1.33
PRKCH-208ENST00000553846 TRAPPC2LQ9UL33 140 aa6.74□□□□□ -1.33
PRKCH-208ENST00000553846 C2orf70A6NJV1 201 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 TMEM212A6NML5 194 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 FAM90A23PA8MXZ1 464 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 B2RBV5 119 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 SLC22A1O15245 554 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 MAGEB3O15480 346 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 CA11O75493 328 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 IGLV2-23P01705 113 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 T-ENOLP0DO92 83 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 SERPINA2P20848 420 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 AADACP22760 399 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 FASP25445 335 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 BMI1P35226 326 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 PJVKQ0ZLH3 352 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 FXYD3Q14802 87 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 HMGN3Q15651 99 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 ATAD3CQ5T2N8 411 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 RAB12Q6IQ22 244 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 LINC00336Q6ZUF6 198 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 TMEM61Q8N0U2 210 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 ADAD2Q8NCV1 583 aaKnown RBP6.73□□□□□ -1.33
PRKCH-208ENST00000553846 OR5T1Q8NG75 326 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 GRPEL2Q8TAA5 225 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 OR14A2Q96R54 314 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 CLCC1Q96S66 551 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 GPER1Q99527 375 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 JAM3Q9BX67 310 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 GABARAPL3Q9BY60 117 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 METTL9Q9H1A3 318 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 RIBC2Q9H4K1 309 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 ISG20L2Q9H9L3 353 aaKnown RBP6.73□□□□□ -1.33
PRKCH-208ENST00000553846 SPACA1Q9HBV2 294 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 PEMTQ9UBM1 199 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 ZNF230Q9UIE0 474 aaPredicted RBP6.73□□□□□ -1.33
PRKCH-208ENST00000553846 WASHC3Q9Y3C0 194 aa6.73□□□□□ -1.33
PRKCH-208ENST00000553846 LOC102724200A0A096LPH7 203 aaPredicted RBP6.72□□□□□ -1.33
PRKCH-208ENST00000553846 TRBV9A0A0B4J1U6 114 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 ST8SIA5O15466 376 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 FAM107AO95990 144 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 MAS1P04201 325 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 FOLR2P14207 255 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 CD40LGP29965 261 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 ZNF45Q02386 682 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 PLGLAQ15195 96 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 SLC25A30Q5SVS4 291 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 SYS1Q8N2H4 156 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 STX19Q8N4C7 294 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 ZNF383Q8NA42 475 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 OR2AK2Q8NG84 335 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 KCNG3Q8TAE7 436 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 NEK7Q8TDX7 302 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 MRPS24Q96EL2 167 aaKnown RBP6.72□□□□□ -1.33
PRKCH-208ENST00000553846 USMG5Q96IX5 58 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 CIB1Q99828 191 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 SULT4A1Q9BR01 284 aa6.72□□□□□ -1.33
PRKCH-208ENST00000553846 EXOGQ9Y2C4 368 aaKnown RBP6.72□□□□□ -1.33
PRKCH-208ENST00000553846 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.71□□□□□ -1.34
PRKCH-208ENST00000553846 DAPL1A0PJW8 107 aa6.71□□□□□ -1.34
PRKCH-208ENST00000553846 FAM90A7PA6NKC0 464 aa6.71□□□□□ -1.34
PRKCH-208ENST00000553846 MCRIP1C9JLW8 97 aa6.71□□□□□ -1.34
PRKCH-208ENST00000553846 H3BNX3 289 aa6.71□□□□□ -1.34
PRKCH-208ENST00000553846 J3QLW9 94 aa6.71□□□□□ -1.34
PRKCH-208ENST00000553846 RAB29O14966 203 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms