RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TRBV12-3P01733 135 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 HLA-DQA1P01909 254 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 APOEP02649 317 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RLN2P04090 185 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 IL4P05112 153 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SNRPAP09012 282 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 COX6B1P14854 86 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 MUC1P15941 1255 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PVALBP20472 110 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ME2P23368 584 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 NPY1RP25929 384 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CASP1P29466 404 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CD40LGP29965 261 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CA5AP35218 305 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CRATP43155 626 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CBX5P45973 191 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 GCLMP48507 274 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PRLHRP49683 370 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PLTPP55058 493 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 GFERP55789 205 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RHOAP61586 193 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SNRPFP62306 86 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ESRRGP62508 458 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 GRB2P62993 217 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 BNIP2Q12982 314 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 GUSBP1Q15486 140 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 UBE2NLQ5JXB2 153 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PLEKHG7Q6ZR37 379 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 CDRT4Q8N9R6 151 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF738Q8NE65 137 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 OR5AK3PQ8NH89 298 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ITLN2Q8WWU7 325 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 HGDQ93099 445 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RMI2Q96E14 147 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RBMXL1Q96E39 390 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 NARS2Q96I59 477 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SMIM8Q96KF7 97 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 KCNS1Q96KK3 526 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF75AQ96N20 296 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RILPQ96NA2 401 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 QKIQ96PU8 341 aaKnown RBP eCLIP1.92□□□□□ -2.11e-6■■■■■ 34.7
SCFD1-210ENST00000553693 OR4K3Q96R72 315 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SMR3AQ99954 134 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 C20orf144Q9BQM9 153 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ANAPC13Q9BS18 74 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 GGTLC1Q9BX51 225 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ULBP3Q9BZM4 244 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 FGF23Q9GZV9 251 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 NXF2Q9GZY0 626 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 OR52D1Q9H346 318 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 C12orf10Q9HB07 376 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 C12orf4Q9NQ89 552 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 IFT46Q9NQC8 304 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SIRT7Q9NRC8 400 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF355PQ9NSJ1 428 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 RBFOX1Q9NWB1 397 aaKnown RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 NKIRAS1Q9NYS0 192 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 COMMD9Q9P000 198 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 ENPP5Q9UJA9 477 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PSMD13Q9UNM6 376 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 TFR2Q9UP52 801 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 POFUT2Q9Y2G5 429 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 PPIL1Q9Y3C6 166 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 TSSC4Q9Y5U2 329 aaPredicted RBP1.92□□□□□ -2.1
SCFD1-210ENST00000553693 SNX10Q9Y5X0 201 aa1.92□□□□□ -2.1
SCFD1-210ENST00000553693 TRPM6Q9BX84 2022 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 IGHV3-49A0A0A0MS15 119 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 A0A0A6YYH2 397 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 IGKV1-8A0A0C4DH67 115 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 C1orf232A0A0U1RR37 186 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 CENPVL3A0A0U1RRI6 287 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 A6NJ64 397 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 LIN7AO14910 233 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-210ENST00000553693 ZW10O43264 779 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 OR2A4O95047 310 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 RCBTB2O95199 551 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 MAS1P04201 325 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 ADRA2AP08913 450 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 SCGB1C2P0DMR2 95 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 RNASE2P10153 161 aaKnown RBP1.91□□□□□ -2.1
SCFD1-210ENST00000553693 ATF1P18846 271 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 PRTN3P24158 256 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 MAGEA3P43357 314 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 OR2B6P58173 313 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 PITPNAQ00169 270 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 PRKCDQ05655 676 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 TPBGQ13641 420 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF235Q14590 738 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 TMEM249Q2WGJ8 235 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 SLC25A35Q3KQZ1 300 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 ACTBL2Q562R1 376 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 RBM48Q5RL73 367 aaKnown RBP1.91□□□□□ -2.1
SCFD1-210ENST00000553693 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.91□□□□□ -2.1
SCFD1-210ENST00000553693 PRR9Q5T870 116 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 TMEM236Q5W0B7 351 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 SAXO2Q658L1 398 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 CLEC6AQ6EIG7 209 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 ZFP1Q6P2D0 407 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 EPGNQ6UW88 154 aa1.91□□□□□ -2.1
SCFD1-210ENST00000553693 SLC16A13Q7RTY0 426 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms