RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-209ENST00000553659 TUSC2O75896 110 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 HAND1O96004 215 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 PSMB6P28072 239 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 DUSP1P28562 367 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 OR2Z1Q8NG97 314 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 OR5T2Q8NGG2 359 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 PPP1R1CQ8WVI7 109 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 KIRREL1Q96J84 757 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 C2orf50Q96LR7 162 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 ZNF48Q96MX3 618 aaPredicted RBP13.2□□□□□ -0.3
ACTN1-209ENST00000553659 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 METTL8Q9H825 291 aaKnown RBP13.2□□□□□ -0.3
ACTN1-209ENST00000553659 IL19Q9UHD0 177 aa13.2□□□□□ -0.3
ACTN1-209ENST00000553659 TRAV14DV4A0A0A6YYC5 116 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 TMEM30CPA0ZSE6 113 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 F5H0A9 414 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-209ENST00000553659 H0YL77 283 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 CLDN34H7C241 214 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 GPR31O00270 319 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 RNASE1P07998 156 aaKnown RBP13.19□□□□□ -0.3
ACTN1-209ENST00000553659 CXCL2P19875 107 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 PI3P19957 117 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 AADACP22760 399 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 FXYD4P59646 89 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 PAX8Q06710 450 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 WDR82Q6UXN9 313 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 ACP7Q6ZNF0 438 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 Q6ZR03 302 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 TMUB2Q71RG4 321 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 C11orf53Q8IXP5 236 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 LGI3Q8N145 548 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 PPP1R35Q8TAP8 253 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 ERGIC1Q969X5 290 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-209ENST00000553659 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-209ENST00000553659 HEXA-AS1Q9H8Q6 139 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 SLC2A9Q9NRM0 540 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 UBQLN2Q9UHD9 624 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 PPP1R3CQ9UQK1 317 aa13.19□□□□□ -0.3
ACTN1-209ENST00000553659 PKD1L1Q8TDX9 2849 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 C13orf42A0A1B0GVH6 325 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 DUXBA0A1W2PPF3 345 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 SIRPB1O00241 398 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 CCSO14618 274 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 WNT2P09544 360 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 NUP62P37198 522 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-209ENST00000553659 GATA4P43694 442 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 PAX5Q02548 391 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 ANKRD55Q3KP44 614 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 TRAT1Q6PIZ9 186 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 TREML4Q6UXN2 200 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 SLC51BQ86UW2 128 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 CMTM1Q8IZ96 169 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 INO80EQ8NBZ0 244 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-209ENST00000553659 ZNF680Q8NEM1 530 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 OR10J5Q8NHC4 309 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 ITLN1Q8WWA0 313 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 MBNL3Q9NUK0 354 aaKnown RBP13.18□□□□□ -0.3
ACTN1-209ENST00000553659 KCNIP1Q9NZI2 227 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 TRAPPC2LQ9UL33 140 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 TNFSF18Q9UNG2 199 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
ACTN1-209ENST00000553659 TRBV6-7A0A0A0MS04 114 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 hCG_1807616A0A1W2PRN6 198 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 TMEM178BH3BS89 294 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 HSPB6O14558 160 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 BET1O15155 118 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 MPC2O95563 127 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 SCTP09683 121 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 PPIAL4GP0DN37 164 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 CD80P33681 288 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 RAB14P61106 215 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 TMEM187Q14656 261 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 PDLIM3Q53GG5 364 aaPredicted RBP13.17□□□□□ -0.3
ACTN1-209ENST00000553659 IGSF11Q5DX21 431 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 C6orf183Q5T699 404 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 Q6ZPA2 131 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 ACOT7LQ6ZUV0 252 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 KCNRGQ8N5I3 272 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 SEC22AQ96IW7 307 aa13.17□□□□□ -0.3
ACTN1-209ENST00000553659 KANTRA0A1W2PQU2 76 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 SRRM5B3KS81 715 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 LYL1P12980 280 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 HTR2BP41595 481 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 DEFA6Q01524 100 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 PAX2Q02962 417 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 SMCO1Q147U7 214 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 HMGN3Q15651 99 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 PRAMEF6Q5VXH4 476 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 PRSS54Q6PEW0 395 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 AKR1E2Q96JD6 320 aa13.16□□□□□ -0.3
ACTN1-209ENST00000553659 MEGF10Q96KG7 1140 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms