RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SNX3O60493 162 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 YPEL1O60688 119 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 RBBP9O75884 186 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 FAM107AO95990 144 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 HTR1AP08908 422 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 CT45A6P0DMU7 189 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 CT45A5P0DMU8 189 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 CT45A7P0DMV0 189 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 EDN2P20800 178 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 LGALS7P47929 136 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 MS4A2Q01362 244 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 GLDNQ6ZMI3 551 aaPredicted RBP10.26□□□□□ -0.77
PRPF39-204ENST00000553605 GVQW1Q8N7I0 195 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 DNAJC9Q8WXX5 260 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 YPEL2Q96QA6 119 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 NDE1Q9NXR1 346 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 ENOPH1Q9UHY7 261 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 JPT1Q9UK76 154 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 SELENOKQ9Y6D0 94 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 HSPG2P98160 4391 aa10.26□□□□□ -0.77
PRPF39-204ENST00000553605 OR4C45A6NMZ5 311 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 H0YJW9 148 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 RAB3AP20336 220 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 EPHA2P29317 976 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 NANOS2P60321 138 aaKnown RBP10.25□□□□□ -0.77
PRPF39-204ENST00000553605 RBMS2Q15434 407 aaKnown RBP10.25□□□□□ -0.77
PRPF39-204ENST00000553605 ANKRD55Q3KP44 614 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 FAM71F2Q6NXP2 309 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 C5orf24Q7Z6I8 188 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 TMEM68Q96MH6 324 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 MFFQ9GZY8 342 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 MBNL3Q9NUK0 354 aaKnown RBP10.25□□□□□ -0.77
PRPF39-204ENST00000553605 IL36GQ9NZH8 169 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 FBXL17Q9UF56 701 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 WASHC3Q9Y3C0 194 aa10.25□□□□□ -0.77
PRPF39-204ENST00000553605 RBMXL2O75526 392 aaKnown RBP10.24□□□□□ -0.77
PRPF39-204ENST00000553605 SERPINA2P20848 420 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 HTD2P86397 168 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 TM4SF20Q53R12 229 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 LY6G6FQ5SQ64 297 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 C6orf141Q5SZD1 244 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 C12orf73Q69YU5 71 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 TMEM61Q8N0U2 210 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 GAPTQ8N292 157 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 OR2AK2Q8NG84 335 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 OR51A2Q8NGJ7 313 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 C11orf45Q8TAV5 145 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 IFI27L2Q9H2X8 130 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 COA4Q9NYJ1 87 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 KCNIP1Q9NZI2 227 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 PIPOXQ9P0Z9 390 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 BOLA1Q9Y3E2 137 aa10.24□□□□□ -0.77
PRPF39-204ENST00000553605 ZAR1LA6NP61 321 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 RAB29O14966 203 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 RTL8CO15255 209 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 MAS1P04201 325 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 CTRB1P17538 263 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 CBLN1P23435 193 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 DAPP51397 102 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 SSBP2P81877 361 aaPredicted RBP10.23□□□□□ -0.77
PRPF39-204ENST00000553605 RPL39P5Q59GN2 51 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 ZNF57Q68EA5 555 aaPredicted RBP10.23□□□□□ -0.77
PRPF39-204ENST00000553605 CTRB2Q6GPI1 263 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 ZNF575Q86XF7 245 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 ADGRG5Q8IZF4 528 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 OR5AN1Q8NGI8 311 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 THRSPQ92748 146 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 PELI1Q96FA3 418 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 S100A13Q99584 98 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 TSNAXQ99598 290 aaKnown RBP10.23□□□□□ -0.77
PRPF39-204ENST00000553605 ALG8Q9BVK2 526 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 JAM3Q9BX67 310 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 SPACA1Q9HBV2 294 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 PAK1IP1Q9NWT1 392 aaPredicted RBP10.23□□□□□ -0.77
PRPF39-204ENST00000553605 TAGLN3Q9UI15 199 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 FBXL7Q9UJT9 491 aa10.23□□□□□ -0.77
PRPF39-204ENST00000553605 A0A1W2PP11 408 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 IGLL5B9A064 214 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 SLC16A6O15403 523 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 SCAF4O95104 1147 aaKnown RBP10.22□□□□□ -0.77
PRPF39-204ENST00000553605 SPDEFO95238 335 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 GTF2F2P13984 249 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 RPS16P62249 146 aaKnown RBP10.22□□□□□ -0.77
PRPF39-204ENST00000553605 DMKNQ6E0U4 476 aaPredicted RBP10.22□□□□□ -0.77
PRPF39-204ENST00000553605 ZNF529Q6P280 563 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 ZNF554Q86TJ5 538 aa10.22□□□□□ -0.77
PRPF39-204ENST00000553605 KIR2DL5BA0A0G2JN68 375 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 KIR2DL5BA0A0G2JPC4 375 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 FAM90A23PA8MXZ1 464 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 J3QLW9 94 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 ZNF780AO75290 641 aaPredicted RBP10.21□□□□□ -0.77
PRPF39-204ENST00000553605 CA11O75493 328 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 RPSAP08865 295 aaKnown RBP10.21□□□□□ -0.77
PRPF39-204ENST00000553605 CPEP16870 476 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 ZNF19P17023 458 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 TMED1Q13445 227 aa10.21□□□□□ -0.77
PRPF39-204ENST00000553605 RIPK1Q13546 671 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms