RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 HLA-HP01893 362 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 METTL15P1P0C7V9 234 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 PATE4P0C8F1 98 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 PSG2P11465 335 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TUBG1P23258 451 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 GDF1P27539 372 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 DDTP30046 118 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 GPX4P36969 197 aaPredicted RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 MPLP40238 635 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 PSMB3P49720 205 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 CLDN18P56856 261 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 RPS18P62269 152 aaKnown RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 SUMO1P63165 101 aaKnown RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TNFRSF9Q07011 255 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 SLC38A11Q08AI6 406 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM267Q0VDI3 215 aaPredicted RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 CATR1Q13166 79 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 EIF4EBP1Q13541 118 aaPredicted RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 HNF4GQ14541 408 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF146Q15072 292 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF585BQ52M93 769 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TM4SF20Q53R12 229 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 CISD2Q8N5K1 135 aaKnown RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF645Q8N7E2 425 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF383Q8NA42 475 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 OR51G1Q8NGK1 321 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 OR1P1Q8NH06 330 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 OR51H1Q8NH63 302 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ABHD3Q8WU67 409 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 WFDC12Q8WWY7 111 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 APH1AQ96BI3 265 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 C14orf144Q96I85 54 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 PACRGQ96M98 296 aaPredicted RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 OR5B12Q96R08 314 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 SMIM7Q9BQ49 75 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 RSG1Q9BU20 258 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 DDA1Q9BW61 102 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 GPR61Q9BZJ8 451 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF552Q9H707 407 aaPredicted RBP4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 HES4Q9HCC6 221 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 TUBG2Q9NRH3 451 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 DEPPQ9NTK1 212 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 KCNIP1Q9NZI2 227 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 SHANK1Q9Y566 2161 aa4.44□□□□□ -1.7
TMEM55B-204ENST00000553602 A0A1B0GV50 99 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 MED19A0JLT2 244 aaPredicted RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 C5orf49A4QMS7 147 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ZFP92A6NM28 416 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 CEBPZOSA8MTT3 80 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 G3V3Y1 287 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 H7BYZ3 331 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 SLC33A1O00400 549 aaPredicted RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 PDE6DO43924 150 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF737O75373 536 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 CLDN14O95500 239 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 AMBPP02760 352 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 RFPL3SP0C7P2 107 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ZNF883P0CG24 379 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 PGA5P0DJD9 388 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 TDGF1P13385 188 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 SELEP16581 610 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 COX5AP20674 150 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ACP1P24666 158 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 IL2RGP31785 369 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 CCKARP32238 428 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 RPL23P62829 140 aaKnown RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 GNB2P62879 340 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ARL16Q0P5N6 197 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 Q0VFX4 171 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 IGFBP7Q16270 282 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 RSPO4Q2I0M5 234 aaPredicted RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 BSXQ3C1V8 233 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 PDLIM3Q53GG5 364 aaPredicted RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ACTL10Q5JWF8 245 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 DCAF12Q5T6F0 453 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 SLC35E4Q6ICL7 350 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 TRAT1Q6PIZ9 186 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 FIP1L1Q6UN15 594 aaKnown RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 Q6ZRM9 215 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 UBALD2Q8IYN6 164 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 RPP25LQ8N5L8 163 aaKnown RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 DRAM1Q8N682 238 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 OR2M7Q8NG81 312 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 OR4X1Q8NH49 305 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 LHX4Q969G2 390 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 NEIL1Q96FI4 390 aaPredicted RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 GMPPAQ96IJ6 420 aaPredicted RBP4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 PSMG3-AS1Q96PY0 264 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 OR4C12Q96R67 309 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 NDUFAF3Q9BU61 184 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 GPR87Q9BY21 358 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 PRO3102Q9H379 93 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 RBKSQ9H477 322 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 KCNIP2Q9NS61 270 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 SLC39A9Q9NUM3 307 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 ABI3Q9P2A4 366 aa4.43□□□□□ -1.7
TMEM55B-204ENST00000553602 IL36RNQ9UBH0 155 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms