RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 CT45A9P0DMV2 189 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CD99P14209 185 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CMPK1P30085 196 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 XCR1P46094 333 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TCL1AP56279 114 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SELENOWP63302 87 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 PDLIM3Q53GG5 364 aaPredicted RBP3.45□□□□□ -1.86
RDH11-204ENST00000553578 CT45A2Q5DJT8 189 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TCTEX1D4Q5JR98 221 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TRIM40Q6P9F5 258 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 ZNF880Q6PDB4 577 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SLC25A26Q70HW3 274 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 PPP1R32Q7Z5V6 425 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TDHQ8IZJ6 230 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NECAP1Q8NC96 275 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 OR4B1Q8NGF8 309 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 OR8S1Q8NH09 359 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SMIM4Q8WVI0 70 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 OR5P2Q8WZ92 322 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SNRNP40Q96DI7 357 aaKnown RBP3.45□□□□□ -1.86
RDH11-204ENST00000553578 RARRES2Q99969 163 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 C19orf24Q9BVV8 132 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TRAPPC2LQ9UL33 140 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 MMP17Q9ULZ9 603 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 WASHC3Q9Y3C0 194 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CSAG2Q9Y5P2 127 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 A0A1W2PPK0 400 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 RNF222A6NCQ9 220 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 NKX2-6A6NCS4 301 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 WIPF3A6NGB9 483 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 K7ESM1 405 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 MT-CO3P00414 261 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KNG1P01042 644 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 FCGR3AP08637 254 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KITLGP21583 273 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 SULT1A2P50226 295 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 ZNF92Q03936 586 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KIR2DS3Q14952 304 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 POU2AF1Q16633 256 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KIAA1644Q3SXP7 199 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 PAPPA-AS1Q5QFB9 102 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CLEC12AQ5QGZ9 265 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 PLXDC2Q6UX71 529 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 OLIG3Q7RTU3 272 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 ZNF761Q86XN6 746 aaPredicted RBP3.45□□□□□ -1.86
RDH11-204ENST00000553578 OR52L1Q8NGH7 329 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 TVP23CQ96ET8 276 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 KRTAP4-8Q9BYQ9 185 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 FUT9Q9Y231 359 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 LSM2Q9Y333 95 aaKnown RBP3.45□□□□□ -1.86
RDH11-204ENST00000553578 ZNF780BQ9Y6R6 833 aa3.45□□□□□ -1.86
RDH11-204ENST00000553578 CPAMD8Q8IZJ3 1885 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 PRSS37A4D1T9 235 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 OR4C45A6NMZ5 311 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 GABARAPH6UMI1 98 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 CLDN34H7C241 214 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 M0R1X1 148 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 HSPB6O14558 160 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 MPDU1O75352 247 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 NXPH3O95157 252 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 SERPINE2P07093 398 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 KLK2P20151 261 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FUT3P21217 361 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 F2RP25116 425 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 DAP3P51398 398 aaKnown RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 SRPXP78539 464 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 ZP4Q12836 540 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 NSDHLQ15738 373 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 ZNF791Q3KP31 576 aaPredicted RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 ZNF429Q86V71 674 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 DOLPP1Q86YN1 238 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FGF14Q92915 247 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 GALMQ96C23 342 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 LINC00470Q9BZP3 86 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 CALHM2Q9HA72 323 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TMEM100Q9NV29 134 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TAAR2Q9P1P5 351 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 A0A1W2PQM1 296 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 A0A1W2PR77 199 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 GAGE12HA6NDE8 117 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 SERINC4A6NH21 518 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 B4DEV8 164 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 M0R2Z0 102 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 SLC16A7O60669 478 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TSPAN13O95857 204 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FGF9P31371 208 aaPredicted RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 GPR6P46095 362 aaPredicted RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 ADIRFQ15847 76 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 PCK2Q16822 640 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TMEM69Q5SWH9 247 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 Q6ZRM9 215 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 CLECL1Q8IZS7 167 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 ACY3Q96HD9 319 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 BMFQ96LC9 184 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 HSPB9Q9BQS6 159 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 FAM103A1Q9BTL3 118 aaKnown RBP3.44□□□□□ -1.86
RDH11-204ENST00000553578 DOHHQ9BU89 302 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 TM2D2Q9BX73 214 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 VN1R1Q9GZP7 353 aa3.44□□□□□ -1.86
RDH11-204ENST00000553578 MOB1AQ9H8S9 216 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms