RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 ARL6IP5O75915 188 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 NAPSAO96009 420 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 UCHL1P09936 223 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 NHLRC4P0CG21 123 aaPredicted RBP9.95□□□□□ -0.82
LINC00643-202ENST00000553426 HSMCR30P0CW71 290 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 ZBTB25P24278 435 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 CNTFRP26992 372 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 PPIFP30405 207 aaKnown RBP9.95□□□□□ -0.82
LINC00643-202ENST00000553426 MC5RP33032 325 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 ECI1P42126 302 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 INSL3P51460 131 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF616Q08AN1 781 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 TMEM267Q0VDI3 215 aaPredicted RBP9.95□□□□□ -0.82
LINC00643-202ENST00000553426 FHL3Q13643 280 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 TRAM1Q15629 374 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF260Q3ZCT1 412 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 LIPKQ5VXJ0 399 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 C5orf24Q7Z6I8 188 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF491Q8N8L2 437 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 RBMXL1Q96E39 390 aaKnown RBP9.95□□□□□ -0.82
LINC00643-202ENST00000553426 RITA1Q96K30 269 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 NICN1Q9BSH3 213 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 IFI27L2Q9H2X8 130 aa9.95□□□□□ -0.82
LINC00643-202ENST00000553426 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 G3V318 75 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 ITGB1BP1O14713 200 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 RBBP9O75884 186 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 NDUFA3O95167 84 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 IGLV1-40P01703 118 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 PSMA1P25786 263 aaKnown RBP9.94□□□□□ -0.82
LINC00643-202ENST00000553426 CD40LGP29965 261 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 CEACAM6P40199 344 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 RAB9AP51151 201 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 MRPS15P82914 257 aaKnown RBP9.94□□□□□ -0.82
LINC00643-202ENST00000553426 RUNX1Q01196 453 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 UNC119Q13432 240 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF660Q6AZW8 331 aaPredicted RBP9.94□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF880Q6PDB4 577 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 FAM131AQ6UXB0 335 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 TCTEX1D1Q8N7M0 179 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 MYOZ3Q8TDC0 251 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 ABHD5Q8WTS1 349 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 TMEM203Q969S6 136 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 RNF150Q9ULK6 438 aa9.94□□□□□ -0.82
LINC00643-202ENST00000553426 LSM2Q9Y333 95 aaKnown RBP9.94□□□□□ -0.82
LINC00643-202ENST00000553426 BIRC6Q9NR09 4857 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 TRBV6-6A0A0A6YYG2 114 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 ERICH4A6NGS2 130 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 I3L521 148 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 SLC17A2O00624 439 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 RRHO14718 337 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 RGS10O43665 173 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 CT45A6P0DMU7 189 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 CT45A5P0DMU8 189 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 CT45A7P0DMV0 189 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 PSMD7P51665 324 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 P2RY14Q15391 338 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 RAB11BQ15907 218 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 RPL39P5Q59GN2 51 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 PYHIN1Q6K0P9 492 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 ABHD14BQ96IU4 210 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 OR5B12Q96R08 314 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 PRR25Q96S07 402 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 RNF5Q99942 180 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 LPAR5Q9H1C0 372 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 KCNK15Q9H427 330 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 FBXL15Q9H469 300 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 GNB4Q9HAV0 340 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 C12orf4Q9NQ89 552 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF221Q9UK13 617 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 HSF4Q9ULV5 492 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF256Q9Y2P7 627 aaPredicted RBP9.93□□□□□ -0.82
LINC00643-202ENST00000553426 WASHC3Q9Y3C0 194 aa9.93□□□□□ -0.82
LINC00643-202ENST00000553426 A0A1W2PN81 502 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 LY86O95711 162 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 CD37P11049 281 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 CPEP16870 476 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 CHRNA7P36544 502 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 VEGFCP49767 419 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 HLA-DRB3P79483 266 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 QRFPP83859 136 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 TPBGQ13641 420 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 ZNF429Q86V71 674 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 FAM89BQ8N5H3 189 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 MINDY2Q8NBR6 621 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 OR56B1Q8NGI3 324 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 CYYR1Q96J86 154 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 TSNAXQ99598 290 aaKnown RBP9.92□□□□□ -0.82
LINC00643-202ENST00000553426 CMSS1Q9BQ75 279 aaKnown RBP9.92□□□□□ -0.82
LINC00643-202ENST00000553426 CCDC90BQ9GZT6 254 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 C11orf54Q9H0W9 315 aaPredicted RBP9.92□□□□□ -0.82
LINC00643-202ENST00000553426 ISYNA1Q9NPH2 558 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 AK3Q9UIJ7 227 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 SCOCQ9UIL1 159 aa9.92□□□□□ -0.82
LINC00643-202ENST00000553426 FOXA2Q9Y261 457 aaPredicted RBP9.92□□□□□ -0.82
LINC00643-202ENST00000553426 AK6Q9Y3D8 172 aaKnown RBP9.92□□□□□ -0.82
LINC00643-202ENST00000553426 A3GALT2U3KPV4 340 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms