RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 A8MWL6 223 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 MUC1P15941 1255 aaPredicted RBP9.97□□□□□ -0.81
SYNE2-208ENST00000553289 SHISA5Q8N114 240 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 FAM222BQ8WU58 562 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 NINQ8N4C6 2090 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 SPINK2P20155 84 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 UCP3P55916 312 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 FAM209AQ5JX71 171 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 OR8G5Q8NG78 346 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 KCNE5Q9UJ90 142 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 CIDEAO60543 219 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 SMAGPQ0VAQ4 97 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 KCNMB1Q16558 191 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 LRRC75BQ2VPJ9 315 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 PQLC2Q6ZP29 291 aa9.97□□□□□ -0.81
SYNE2-208ENST00000553289 CD74P04233 296 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 GPR6P46095 362 aaPredicted RBP9.96□□□□□ -0.81
SYNE2-208ENST00000553289 IZUMO4Q1ZYL8 232 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 MMD2Q8IY49 270 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 SAP25Q8TEE9 199 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 TMEM171Q8WVE6 324 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 TDRD15B5MCY1 1934 aaKnown RBP9.96□□□□□ -0.81
SYNE2-208ENST00000553289 CEACAM18A8MTB9 384 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 DLL1O00548 723 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 PGLYRP1O75594 196 aaPredicted RBP9.96□□□□□ -0.81
SYNE2-208ENST00000553289 HKR1P10072 659 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 AREGP15514 252 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 RPL7P18124 248 aaKnown RBP9.96□□□□□ -0.81
SYNE2-208ENST00000553289 CLDN18P56856 261 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 TUSC1Q2TAM9 212 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 SLC25A45Q8N413 288 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 CYB561D1Q8N8Q1 229 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 OR2D3Q8NGH3 330 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 G6PC2Q9NQR9 355 aa9.96□□□□□ -0.81
SYNE2-208ENST00000553289 COL4A5P29400 1685 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 MAP1BP46821 2468 aaKnown RBP9.96□□□□□ -0.82
SYNE2-208ENST00000553289 PIN1P1O15428 100 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 MEF2BQ02080 365 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-208ENST00000553289 C10orf128Q5T292 105 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 LRRC75AQ8NAA5 344 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 LSM10Q969L4 123 aaKnown RBP9.96□□□□□ -0.82
SYNE2-208ENST00000553289 Q96M66 194 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 HS3ST3B1Q9Y662 390 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 IGKV1D-42A0A075B6H8 117 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 SCTP09683 121 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF735P0CB33 412 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 CD99P14209 185 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 LINC01590Q5TEZ4 76 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 SGMS2Q8NHU3 365 aa9.96□□□□□ -0.82
SYNE2-208ENST00000553289 RGP1Q92546 391 aaPredicted RBP9.96□□□□□ -0.82
SYNE2-208ENST00000553289 MRPL37Q9BZE1 423 aaKnown RBP9.96□□□□□ -0.82
SYNE2-208ENST00000553289 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 ATG101Q9BSB4 218 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 MYO16Q9Y6X6 1858 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 C4orf51C9J302 202 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 CCL21O00585 134 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 RPS11P62280 158 aaKnown RBP eCLIP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 TAF15Q92804 592 aaKnown RBP eCLIP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 DCAF16Q9NXF7 216 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 JPT1Q9UK76 154 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 ATP5IP56385 69 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 RUNX1Q01196 453 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 FGF11Q92914 225 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 WFDC6Q9BQY6 131 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 DLL3Q9NYJ7 618 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 PILRBQ9UKJ0 227 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 A0A1W2PP11 408 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 CFDP00746 253 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 RPL8P62917 257 aaKnown RBP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 SELENOHQ8IZQ5 122 aaKnown RBP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 SFXN3Q9BWM7 321 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 MS4A7Q9GZW8 240 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 RBKSQ9H477 322 aa9.95□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF552Q9H707 407 aaPredicted RBP9.95□□□□□ -0.82
SYNE2-208ENST00000553289 CXorf65A6NEN9 183 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM14DPA8MWL7 114 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 COX6A1P12074 109 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 WNT5AP41221 380 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 BPIFA4PQ86YQ2 179 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 CCL13Q99616 98 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 C19orf24Q9BVV8 132 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 MIOXQ9UGB7 285 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 RBBP6Q7Z6E9 1792 aaKnown RBP9.94□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 CELA2AP08217 269 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM54Q969K7 222 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 RHOVQ96L33 236 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 GCSHP23434 173 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 CTSSP25774 331 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 PTGDSP41222 190 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF383Q8NA42 475 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 GP6Q9HCN6 339 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 IDI2-AS1Q9NZ38 188 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 ODAMA1E959 279 aa9.94□□□□□ -0.82
SYNE2-208ENST00000553289 KLF7O75840 302 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms