RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ROPN1LQ96C74 230 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 FXYD5Q96DB9 178 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 REEP6Q96HR9 211 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 CCDC115Q96NT0 180 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 TCEAL7Q9BRU2 100 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 PBDC1Q9BVG4 233 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 PRTFDC1Q9NRG1 225 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 HEY1Q9Y5J3 304 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 HEBP2Q9Y5Z4 205 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 GOLGB1Q14789 3259 aaKnown RBP3.17□□□□□ -1.9
USP44-208ENST00000552440 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.17□□□□□ -1.9
USP44-208ENST00000552440 C1orf167Q5SNV9 1468 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 CCDC18Q5T9S5 1454 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 MYH3P11055 1940 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 MYH15Q9Y2K3 1946 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 ADAMTS13Q76LX8 1427 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 DHX57Q6P158 1386 aaKnown RBP3.17□□□□□ -1.9
USP44-208ENST00000552440 BRWD3Q6RI45 1802 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 CDC42BPAQ5VT25 1732 aa3.17□□□□□ -1.9
USP44-208ENST00000552440 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 IGHV6-1A0A0B4J1U7 121 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TRAV26-2A0A0B4J265 109 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 LOC389332A0A1B0GUA5 103 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 CIB4A0PJX0 185 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 FAM25AB3EWG3 89 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 FAM25CB3EWG5 89 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 FAM25GB3EWG6 89 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 SHISA9B4DS77 424 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 H7C1C5 153 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 UPK1AO00322 258 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TXNDC9O14530 226 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TPST1O60507 370 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TBL1XO60907 577 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 IGHV3-48P01763 117 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 APOA2P02652 100 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 SERPINE1P05121 402 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 SMIM6P0DI80 62 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 CD200P41217 278 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 NCALDP61601 193 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 LCN6P62502 163 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 IFITM3Q01628 133 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZNF616Q08AN1 781 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 IL15RAQ13261 267 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 RBMY1FQ15415 496 aaKnown RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 KRTAP27-1Q3LI81 207 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 FBXL19-AS1Q494R0 122 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 C9orf66Q5T8R8 295 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 PLET1Q6UQ28 207 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZNF493Q6ZR52 646 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 Q6ZRU5 148 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 RFLNAQ6ZTI6 216 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 CLEC20AQ6ZU45 233 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 FA2HQ7L5A8 372 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 VN1R4Q7Z5H5 301 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZNF589Q86UQ0 364 aaPredicted RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 TMEM61Q8N0U2 210 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TMEM252Q8N6L7 170 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZIC4Q8N9L1 334 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 OR8B12Q8NGG6 310 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZNF675Q8TD23 568 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 FAM151AQ8WW52 585 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 NEURL3Q96EH8 262 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 SLC45A3Q96JT2 553 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 SLC35E1Q96K37 410 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 LINC01587Q99440 93 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TMEM126AQ9H061 195 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 C6orf106Q9H6K1 298 aaPredicted RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 MMP26Q9NRE1 261 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 CCL28Q9NRJ3 127 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 MARCH5Q9NX47 278 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ENPP4Q9Y6X5 453 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 RGPD1P0DJD0 1748 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ADGRB3O60242 1522 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 KLLNB2CW77 178 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 KBTBD11O94819 623 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 PLA2G2AP14555 144 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 GADD45AP24522 165 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TALDO1P37837 337 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 TMEM267Q0VDI3 215 aaPredicted RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 RNF212Q495C1 297 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 STPG1Q5TH74 334 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZNF343Q6P1L6 599 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 GDPD1Q8N9F7 314 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 CT55Q8WUE5 264 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 SLC25A44Q96H78 314 aaPredicted RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 CNBD2Q96M20 576 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 OR7D2Q96RA2 312 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 ZNF184Q99676 751 aaPredicted RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 MRPL20Q9BYC9 149 aaKnown RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 POLR2J2Q9GZM3 115 aaKnown RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 TMEM222Q9H0R3 208 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 POLR2J3Q9H1A7 115 aaKnown RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 NOX3Q9HBY0 568 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 COA4Q9NYJ1 87 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 TMEM216Q9P0N5 145 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 INSIG2Q9Y5U4 225 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 F11RQ9Y624 299 aaKnown RBP3.16□□□□□ -1.9
USP44-208ENST00000552440 PIK3C2BO00750 1634 aa3.16□□□□□ -1.9
USP44-208ENST00000552440 NOS1P29475 1434 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms