RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 EIF4EP06730 217 aaKnown RBP2.71□□□□□ -1.98
LIMA1-208ENST00000551691 CHTF8P0CG12 524 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 OR5H8P0DN80 308 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 BGNP21810 368 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 PAX6P26367 422 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 LCN1P31025 176 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 GPX4P36969 197 aaPredicted RBP2.71□□□□□ -1.98
LIMA1-208ENST00000551691 CEACAM6P40199 344 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 SERPINB8P50452 374 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 CAV2P51636 162 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 RAP1GDS1P52306 607 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 UBE2KP61086 200 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 PAFAH1B2P68402 229 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 GLO1Q04760 184 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 UNC119Q13432 240 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 GINS1Q14691 196 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 SGCAQ16586 387 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 NDUFAF6Q330K2 333 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 WDR82Q6UXN9 313 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 CASP12Q6UXS9 341 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 TRMT10CQ7L0Y3 403 aaKnown RBP2.71□□□□□ -1.98
LIMA1-208ENST00000551691 OR9A2Q8NGT5 310 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 ANGPTL6Q8NI99 470 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 BAALCQ8WXS3 180 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.71□□□□□ -1.98
LIMA1-208ENST00000551691 ANKRD7Q92527 254 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 NEURL3Q96EH8 262 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 WDR34Q96EX3 536 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 DUS3LQ96G46 650 aaKnown RBP2.71□□□□□ -1.98
LIMA1-208ENST00000551691 C16orf74Q96GX8 76 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF681Q96N22 645 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 PPP1R2P1Q96PQ5 205 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 KIFC1Q9BW19 673 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 MAP1LC3CQ9BXW4 147 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 ULBP2Q9BZM5 246 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 OR51B6Q9H340 312 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 STX18Q9P2W9 335 aaKnown RBP2.71□□□□□ -1.98
LIMA1-208ENST00000551691 CFL2Q9Y281 166 aa2.71□□□□□ -1.98
LIMA1-208ENST00000551691 NUP214P35658 2090 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-208ENST00000551691 KIR2DS1A0A191URI9 304 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 A6NDN8 102 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ZFP92A6NM28 416 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ANKRD65E5RJM6 399 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 H0YHG0 523 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 PEX7O00628 323 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 PFDN6O15212 129 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 C6orf47O95873 294 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 IGKV3-15P01624 115 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 OPN1SWP03999 348 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 CBR1P16152 277 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 OGNP20774 298 aaKnown RBP2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ZBTB25P24278 435 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 GABRA3P34903 492 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 P2RX1P51575 399 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 DSTNP60981 165 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 UBE2NP61088 152 aaKnown RBP2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ERVS71-1P61550 626 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 PPP1CBP62140 327 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ST3GAL4Q11206 333 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 STX3Q13277 289 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 COTL1Q14019 142 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 RBMY1FQ15415 496 aaKnown RBP2.7□□□□□ -1.98
LIMA1-208ENST00000551691 TSNQ15631 228 aaKnown RBP2.7□□□□□ -1.98
LIMA1-208ENST00000551691 LY6EQ16553 131 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 POU2AF1Q16633 256 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 LRRN1Q6UXK5 716 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF493Q6ZR52 646 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 MDP1Q86V88 176 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 SPATA24Q86W54 205 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 NDUFA11Q86Y39 141 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 LRRC8AQ8IWT6 810 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 FAM9CQ8IZT9 166 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 SYS1Q8N2H4 156 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 C17orf78Q8N4C9 275 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ZIC4Q8N9L1 334 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 UBAC2Q8NBM4 344 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF485Q8NCK3 441 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 GPR119Q8TDV5 335 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 C7orf33Q8WU49 177 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 TMEM239Q8WW34 195 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 CIB1Q99828 191 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 SLC25A2Q9BXI2 301 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 VNN3Q9NY84 501 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 FBXO5Q9UKT4 447 aa2.7□□□□□ -1.98
LIMA1-208ENST00000551691 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 DMBT1Q9UGM3 2413 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 RNASEK-C17orf49H0YIS7 233 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 K7EMT4 169 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 SLC16A7O60669 478 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 LHBP01229 141 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 PTHP01270 115 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 IGHV3-43DP0DP04 118 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 CD37P11049 281 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 ZNF35P13682 527 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 KRTAP5-9P26371 169 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 GLRXP35754 106 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 TGFBR2P37173 567 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 RBM34P42696 430 aaKnown RBP2.69□□□□□ -1.98
LIMA1-208ENST00000551691 CSNK1A1P48729 337 aa2.69□□□□□ -1.98
LIMA1-208ENST00000551691 RND2P52198 227 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms