RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 WRBO00258 174 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 YPEL1O60688 119 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 P0C879 139 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 TNFRSF1AP19438 455 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 EDDM3BP56851 147 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 LOXL3P58215 753 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 BRWD1-AS2P59051 145 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 CCL8P80075 99 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 ADORA2A-AS1P86434 159 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 TLE1Q04724 770 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 LTC4SQ16873 150 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 SWI5Q1ZZU3 235 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 Q3ZCU0 254 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 MORN2Q502X0 79 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 ZNF66Q6ZN08 573 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 FAM216BQ8N7L0 139 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 DEFB108BQ8NET1 73 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 PLPPR2Q96GM1 343 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 YPEL2Q96QA6 119 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 CCL13Q99616 98 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 GINS3Q9BRX5 216 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 AGMATQ9BSE5 352 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 NGBQ9NPG2 151 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 OR6C3Q9NZP0 311 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 LPAR3Q9UBY5 353 aa9.55□□□□□ -0.88
RAB5C-208ENST00000551338 BORCS7-ASMTA0A0B4J1R7 106 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 LINC00473A8K010 186 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 B8ZZF3 427 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 CCL21O00585 134 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 SIGLEC5O15389 551 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 RAMP3O60896 148 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 FBXO24O75426 580 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 S1PR2O95136 353 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 GYPAP02724 150 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 IRF2P14316 349 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 MUC1P15941 1255 aaPredicted RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 GZMHP20718 246 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 CAV2P51636 162 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 ZNF816Q0VGE8 651 aaPredicted RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 MIDNQ504T8 468 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 OR2B11Q5JQS5 317 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 FAM209AQ5JX71 171 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 EIF5AL1Q6IS14 154 aaKnown RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 ZCCHC24Q8N2G6 241 aaKnown RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 FGFRL1Q8N441 504 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 TCTEX1D1Q8N7M0 179 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 FAM216AQ8WUB2 273 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 TCTEX1D2Q8WW35 142 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 EDARADDQ8WWZ3 215 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 RNASE6Q93091 150 aaKnown RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 SAT2Q96F10 170 aaPredicted RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 SMIM8Q96KF7 97 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 SLC25A31Q9H0C2 315 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 FAM234AQ9H0X4 552 aa9.54□□□□□ -0.88
RAB5C-208ENST00000551338 FAM212BQ9NTI7 297 aaPredicted RBP9.54□□□□□ -0.88
RAB5C-208ENST00000551338 RAB19A4D1S5 217 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 ZNF705EA8MWA4 302 aaPredicted RBP9.53□□□□□ -0.88
RAB5C-208ENST00000551338 KRBOX1C9JBD0 128 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 SLC31A2O15432 143 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 CHST1O43916 411 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 PROP1O75360 226 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 CLDN1O95832 211 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 SEC11BP0C7V7 166 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 GRNP28799 593 aaKnown RBP9.53□□□□□ -0.88
RAB5C-208ENST00000551338 CHRNB4P30926 498 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 CDSNQ15517 529 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 UTF1Q5T230 341 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 PXDC1Q5TGL8 231 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 SPAG16Q8N0X2 631 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 ZCCHC14Q8WYQ9 949 aaKnown RBP9.53□□□□□ -0.88
RAB5C-208ENST00000551338 MARC2Q969Z3 335 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 HSD17B10Q99714 261 aaKnown RBP9.53□□□□□ -0.88
RAB5C-208ENST00000551338 IFI27L2Q9H2X8 130 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 PRORYQ9H606 182 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 GFOD1Q9NXC2 390 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 COA4Q9NYJ1 87 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 TAS2R3Q9NYW6 316 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 GNG12Q9UBI6 72 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 MMP24Q9Y5R2 645 aa9.53□□□□□ -0.88
RAB5C-208ENST00000551338 NKX6-3A6NJ46 265 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF729A6NN14 1252 aaPredicted RBP9.52□□□□□ -0.89
RAB5C-208ENST00000551338 ITGB1BP1O14713 200 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 SIAH2O43255 324 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 TXNL1O43396 289 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 SYNGR2O43760 224 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 MED6O75586 246 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 FCN3O75636 299 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 SCO1O75880 301 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 PLAUP00749 431 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 CD3EP07766 207 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 SPP1P10451 314 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 OMGP23515 440 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 LOXP28300 417 aaPredicted RBP9.52□□□□□ -0.89
RAB5C-208ENST00000551338 DUTP33316 252 aaKnown RBP9.52□□□□□ -0.89
RAB5C-208ENST00000551338 G6PCP35575 357 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 GPR12P47775 334 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 DYNLT3P51808 116 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 LINC00205P59089 165 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 RPL23AP62750 156 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms