RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 RPS23P62266 143 aaKnown RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 EIF4EBP2Q13542 120 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 MPPED2Q15777 294 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 ATP6V1FQ16864 119 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 TMEM176BQ3YBM2 270 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 HACD4Q5VWC8 232 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 FAHD1Q6P587 224 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 CBLN2Q8IUK8 224 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 TRAPPC5Q8IUR0 188 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 TMEM35BQ8NCS4 154 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 LFNGQ8NES3 379 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 OR2Y1Q8NGV0 311 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PTH2Q96A98 100 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PPWD1Q96BP3 646 aaKnown RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 LRRC58Q96CX6 371 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 GALNT14Q96FL9 552 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 RNF185Q96GF1 192 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 CENPNQ96H22 339 aaPredicted RBP3.61□□□□□ -1.83
CPSF6-206ENST00000550987 NIPSNAP1Q9BPW8 284 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 COPS4Q9BT78 406 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 IFI27L2Q9H2X8 130 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PLEKHA1Q9HB21 404 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 FBXO8Q9NRD0 319 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PRR34Q9NV39 138 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 PARVAQ9NVD7 372 aa3.61□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF729A6NN14 1252 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 H7C1H1 209 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 H7C417 338 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 hCG_2039718K7EN88 272 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 MAGEB4O15481 346 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 HPGDSO60760 199 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 ADAP1O75689 374 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 VAMP5O95183 116 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 RCBTB2O95199 551 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 SLC25A14O95258 325 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 KRT75O95678 551 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 SERPINA1P01009 418 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 IGLV2-23P01705 113 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 IGLV3-25P01717 112 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 CATP04040 527 aaKnown RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 CALB1P05937 261 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 GFAPP14136 432 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 ELK1P19419 428 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 CELP19835 753 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 OMGP23515 440 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 CSNK1A1P48729 337 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 CCR6P51684 374 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF138P52744 262 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 OR4D2P58180 307 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 ARG2P78540 354 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 ERCC8Q13216 396 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 POU6F1Q14863 301 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 IRF4Q15306 451 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 RSPO1Q2MKA7 263 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 FAM45BPQ6NSW5 357 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 C22orf39Q6P5X5 142 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 FAM131AQ6UXB0 335 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 MRPL52Q86TS9 123 aaKnown RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 CALHM1Q8IU99 346 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 NPWQ8N729 165 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 OR11H7Q8NGC8 314 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 OR10AD1Q8NGE0 317 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 OR10G4Q8NGN3 311 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 OR51A7Q8NH64 312 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 PIGXQ8TBF5 258 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 FAM45AQ8TCE6 357 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 PATE1Q8WXA2 126 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 TFGQ92734 400 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 EXOSC8Q96B26 276 aaKnown RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 TM4SF18Q96CE8 201 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 SEH1LQ96EE3 360 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 PDXPQ96GD0 296 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 FAM210BQ96KR6 192 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 PRAP1Q96NZ9 151 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 PLEKHF2Q9H8W4 249 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 MYOZ1Q9NP98 299 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 GID8Q9NWU2 228 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 MTFP1Q9UDX5 166 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 TFR2Q9UP52 801 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 PSG8Q9UQ74 426 aa3.6□□□□□ -1.83
CPSF6-206ENST00000550987 FLG2Q5D862 2391 aaPredicted RBP3.6□□□□□ -1.83
CPSF6-206ENST00000550987 TRBV6-6A0A0A6YYG2 114 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 IGHV3-74A0A0B4J1X5 117 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ANKRD65E5RJM6 399 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 FTCDNL1E5RQL4 147 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 INS-IGF2F8WCM5 200 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 H0Y980 276 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 DFFAO00273 331 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 SSNA1O43805 119 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 CTNSO60931 367 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 TCRBP04435 133 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ISG15P05161 165 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 HLA-GP17693 338 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 COILP38432 576 aaPredicted RBP3.59□□□□□ -1.83
CPSF6-206ENST00000550987 GABRA4P48169 554 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 FABP6P51161 128 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 ZNF136P52737 540 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 CDKN2DP55273 166 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 AP1S1P61966 158 aa3.59□□□□□ -1.83
CPSF6-206ENST00000550987 LSM6P62312 80 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms