RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 ATP5SQ99766 215 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 KCNJ16Q9NPI9 418 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 PRELID3BQ9Y3B1 194 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 PUS1Q9Y606 427 aaKnown RBP eCLIP11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 INTS1Q8N201 2190 aaKnown RBP11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 USF3Q68DE3 2245 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 RBFOX3A6NFN3 312 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 C1QTNF9BB2RNN3 333 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 HBZP02008 142 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 SULT1A1P50225 295 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 RAB13P51153 203 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 BAXQ07812 192 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF816Q0VGE8 651 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 ACP7Q6ZNF0 438 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 GALMQ96C23 342 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 SCNM1Q9BWG6 230 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 OR2D2Q9H210 308 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 PLSCR4Q9NRQ2 329 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 SMCO4Q9NRQ5 59 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 PSENENQ9NZ42 101 aa11.89□□□□□ -0.51
CALCOCO1-218ENST00000550804 ACACAQ13085 2346 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 IGHV1-18A0A0C4DH31 117 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 G6PCP35575 357 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 RPL35P42766 123 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 LTC4SQ16873 150 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 SPANXN5Q5MJ07 72 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 STX12Q86Y82 276 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 RBMXL3Q8N7X1 1067 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF71Q9NQZ8 489 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 IGHV3-7P01780 117 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 MMP9P14780 707 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 IL2RGP31785 369 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 AKR1D1P51857 326 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 RPS16P62249 146 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 RPL23AP62750 156 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 COL10A1Q03692 680 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 AVPI1Q5T686 147 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 MOB1BQ7L9L4 216 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 OR13A1Q8NGR1 328 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 PBDC1Q9BVG4 233 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 KCNIP1Q9NZI2 227 aa11.88□□□□□ -0.51
CALCOCO1-218ENST00000550804 RELNP78509 3460 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 IGHV2OR16-5A0A0B4J2B6 119 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 A0A1W2PPE2 198 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 TMEM30CPA0ZSE6 113 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 TMEM210A6NLX4 147 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 CD55P08174 381 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 TAS2R30P59541 319 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 SP5Q6BEB4 398 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 LSM10Q969L4 123 aaKnown RBP11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 RBMXL1Q96E39 390 aaKnown RBP11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 RAB40CQ96S21 281 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 CXXC4Q9H2H0 198 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
CALCOCO1-218ENST00000550804 A0A1W2PPH5 198 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 OR5H1A6NKK0 313 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 C17orf98A8MV24 154 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 CGAP01215 116 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 SLC25A6P12236 298 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 FAM209BQ5JX69 171 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 AKR1C8PQ5T2L2 129 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 FAM24BQ8N5W8 94 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 CD177Q8N6Q3 437 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 GNPNAT1Q96EK6 184 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 WASF3Q9UPY6 502 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 AHRRA9YTQ3 701 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 EDDM3AQ14507 147 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 SPINK9Q5DT21 86 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 SSX7Q7RTT5 188 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 OR2Z1Q8NG97 314 aa11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 LIN7CQ9NUP9 197 aaKnown RBP11.86□□□□□ -0.51
CALCOCO1-218ENST00000550804 hCG_1809904A0A1W2PP81 198 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 A0A1W2PR64 198 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 A0A1W2PRV1 198 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 GFRA3O60609 400 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 EGR1P18146 543 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 GCH1P30793 250 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF83P51522 516 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 FGF8P55075 233 aaPredicted RBP11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 UBE2KP61086 200 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF645Q8N7E2 425 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 C12orf57Q99622 126 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 S1PR2O95136 353 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 IFNA5P01569 189 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 IGLV1-44P01699 117 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 ICAM4Q14773 271 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF718Q3SXZ3 478 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 OR8G2PQ6IF36 304 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 C22orf34Q6ZV56 151 aa11.85□□□□□ -0.51
CALCOCO1-218ENST00000550804 ZNF525Q8N782 197 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms