RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 TNFRSF9Q07011 255 aa12.73□□□□□ -0.37
PDE1B-207ENST00000550620 ACSM6Q6P461 480 aa12.73□□□□□ -0.37
PDE1B-207ENST00000550620 MRPL41Q8IXM3 137 aaKnown RBP12.73□□□□□ -0.37
PDE1B-207ENST00000550620 FGFRL1Q8N441 504 aa12.73□□□□□ -0.37
PDE1B-207ENST00000550620 OR6C3Q9NZP0 311 aa12.73□□□□□ -0.37
PDE1B-207ENST00000550620 ABCA7Q8IZY2 2146 aa12.73□□□□□ -0.37
PDE1B-207ENST00000550620 LCN2P80188 198 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 C9orf135Q5VTT2 229 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 PRR18Q8N4B5 295 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 TMEM37Q8WXS4 190 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 NEIL1Q96FI4 390 aaPredicted RBP12.72□□□□□ -0.37
PDE1B-207ENST00000550620 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 PRDM6Q9NQX0 595 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
PDE1B-207ENST00000550620 RANBP2P49792 3224 aaKnown RBP12.72□□□□□ -0.37
PDE1B-207ENST00000550620 B4E171 279 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 SYNGR4O95473 234 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 TSPAN7P41732 249 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 LBX1P52954 281 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 GFRA1P56159 465 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 PLP2Q04941 152 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 RTP5Q14D33 572 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 PRRG4Q9BZD6 226 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 HSPB7Q9UBY9 170 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 TNRC6BQ9UPQ9 1833 aaKnown RBP12.71□□□□□ -0.37
PDE1B-207ENST00000550620 VCANP13611 3396 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 TCAPO15273 167 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 CNN1P51911 297 aaKnown RBP12.71□□□□□ -0.37
PDE1B-207ENST00000550620 NUTF2P61970 127 aaKnown RBP12.71□□□□□ -0.37
PDE1B-207ENST00000550620 FFAR4Q5NUL3 377 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 TGIF2LXQ8IUE1 241 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 ZNF709Q8N972 641 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 POM121L2Q96KW2 1035 aa12.71□□□□□ -0.37
PDE1B-207ENST00000550620 J3QT63 122 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 HMGB3O15347 200 aaKnown RBP12.7□□□□□ -0.38
PDE1B-207ENST00000550620 NGFP01138 241 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 SNRPCP09234 159 aaKnown RBP12.7□□□□□ -0.38
PDE1B-207ENST00000550620 TRA2AQ13595 282 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDE1B-207ENST00000550620 Q6P435 159 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 ZNF497Q6ZNH5 498 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 DRAM1Q8N682 238 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 ZBTB34Q8NCN2 500 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 C17orf112F2Z3M2 114 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 CD99P14209 185 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 PAX5Q02548 391 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 CLEC12BQ2HXU8 276 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 ZNF576Q9H609 170 aa12.7□□□□□ -0.38
PDE1B-207ENST00000550620 ZNHIT1O43257 154 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 IL18BPO95998 194 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 CXCL12P48061 93 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 HNF4GQ14541 408 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 Q8IYB0 196 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 GBGT1Q8N5D6 347 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 CIB3Q96Q77 187 aaPredicted RBP12.69□□□□□ -0.38
PDE1B-207ENST00000550620 NEU1Q99519 415 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
PDE1B-207ENST00000550620 CEP192Q8TEP8 1941 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 PAGE4O60829 102 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 CCL4P13236 92 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 CYB561P49447 251 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 PPP1CBP62140 327 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 ZNF645Q8N7E2 425 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 MRPL37Q9BZE1 423 aaKnown RBP12.69□□□□□ -0.38
PDE1B-207ENST00000550620 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.69□□□□□ -0.38
PDE1B-207ENST00000550620 DEPPQ9NTK1 212 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 WASF3Q9UPY6 502 aa12.69□□□□□ -0.38
PDE1B-207ENST00000550620 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
PDE1B-207ENST00000550620 TRAV39A0A0B4J263 110 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 C11orf94C9JXX5 98 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 SIRPB1O00241 398 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 PDE6DO43924 150 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 RHBDL1O75783 438 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 OR2H2O95918 312 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 SERPINA7P05543 415 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 HLA-BQ31612 363 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 TUSC5Q8IXB3 177 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 GATAD1Q8WUU5 269 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 IMMP2LQ96T52 175 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 NPCDR1Q9BY65 106 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 MBNL3Q9NUK0 354 aaKnown RBP12.68□□□□□ -0.38
PDE1B-207ENST00000550620 WIPI2Q9Y4P8 454 aa12.68□□□□□ -0.38
PDE1B-207ENST00000550620 TNRC6AQ8NDV7 1962 aaKnown RBP12.67□□□□□ -0.38
PDE1B-207ENST00000550620 ZNF503-AS2A6NEH8 195 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 LRRC30A6NM36 301 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 K7ESF4 209 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 RAC2P15153 192 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 TLE1Q04724 770 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 CATR1Q13166 79 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 RTL8AQ9BWD3 113 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 FKBP11Q9NYL4 201 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 POLDIP2Q9Y2S7 368 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 A0A1W2PR80 420 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 MLNRO43193 412 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 PDGFBP01127 241 aaPredicted RBP12.67□□□□□ -0.38
PDE1B-207ENST00000550620 CA6P23280 308 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 OTX2P32243 289 aa12.67□□□□□ -0.38
PDE1B-207ENST00000550620 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms